RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 C20orf173Q96LM9 149 aa11.16□□□□□ -0.62
CRTC3-210ENST00000560927 GATA1P15976 413 aaPredicted RBP11.16□□□□□ -0.62
CRTC3-210ENST00000560927 Q6ZS46 218 aa11.16□□□□□ -0.62
CRTC3-210ENST00000560927 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
CRTC3-210ENST00000560927 H3BUX3 64 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 IGHV3-11P01762 117 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 HBDP02042 147 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 EVI2AP22794 236 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 MRPL53Q96EL3 112 aaKnown RBP11.15□□□□□ -0.62
CRTC3-210ENST00000560927 KLK15Q9H2R5 256 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 MS4A6AQ9H2W1 248 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 CSMD2Q7Z408 3487 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 TCF21O43680 179 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 IGF1P05019 195 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 ATP5J2P56134 94 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 BLCAPP62952 87 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 PRR9Q5T870 116 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 C9orf47Q6ZRZ4 202 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 LCNL1Q6ZST4 164 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 GPHB5Q86YW7 130 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 WFDC3Q8IUB2 231 aa11.15□□□□□ -0.62
CRTC3-210ENST00000560927 CACNG7P62955 275 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
CRTC3-210ENST00000560927 UTP20O75691 2785 aaKnown RBP11.14□□□□□ -0.63
CRTC3-210ENST00000560927 IGHV7-4-1A0A0J9YVY3 117 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 SNAI2O43623 268 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 NUDT3O95989 172 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 DEFB1P60022 68 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 CLEC2AQ6UVW9 174 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 PPP1R14DQ9NXH3 145 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
CRTC3-210ENST00000560927 USP9XQ93008 2570 aaPredicted RBP11.13□□□□□ -0.63
CRTC3-210ENST00000560927 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 ATP6V0BQ99437 205 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 IGSF10Q6WRI0 2623 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 A6NDX4 124 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 J3KRW8 73 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 IGHG2P01859 326 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 TCTAP57738 103 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 ANKRD39Q53RE8 183 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 MAP1LC3AQ9H492 121 aa11.13□□□□□ -0.63
CRTC3-210ENST00000560927 PPBPP02775 128 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 ZNF738Q8NE65 137 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 IFI27L1Q96BM0 104 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 HIF1ANQ9NWT6 349 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 SELENOKQ9Y6D0 94 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 COX11Q9Y6N1 276 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 CACNA1AO00555 2505 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 NDUFS8O00217 210 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 NDUFA4O00483 81 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 AVPP01185 164 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 COX8AP10176 69 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 LGALS9BQ3B8N2 356 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 BVES-AS1Q5T3Y7 98 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 LGALS9CQ6DKI2 356 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 C18orf15Q96N68 181 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 DOPEY1Q5JWR5 2465 aa11.12□□□□□ -0.63
CRTC3-210ENST00000560927 MSMBP08118 114 aa11.11□□□□□ -0.63
CRTC3-210ENST00000560927 PF4V1P10720 104 aa11.11□□□□□ -0.63
CRTC3-210ENST00000560927 C9orf139Q6ZV77 190 aa11.11□□□□□ -0.63
CRTC3-210ENST00000560927 NRGNQ92686 78 aa11.11□□□□□ -0.63
CRTC3-210ENST00000560927 TRAV26-2A0A0B4J265 109 aa11.11□□□□□ -0.63
CRTC3-210ENST00000560927 C2orf91Q6ZV80 131 aa11.11□□□□□ -0.63
CRTC3-210ENST00000560927 SOCS3O14543 225 aa11.1□□□□□ -0.63
CRTC3-210ENST00000560927 IGKV3-7A0A075B6H7 116 aa11.1□□□□□ -0.63
CRTC3-210ENST00000560927 LINC01546A6NGU7 62 aa11.1□□□□□ -0.63
CRTC3-210ENST00000560927 LEPP41159 167 aa11.1□□□□□ -0.63
CRTC3-210ENST00000560927 ERASQ7Z444 233 aa11.1□□□□□ -0.63
CRTC3-210ENST00000560927 OR4X2Q8NGF9 303 aa11.1□□□□□ -0.63
CRTC3-210ENST00000560927 H3BVH4 76 aa11.09□□□□□ -0.63
CRTC3-210ENST00000560927 SPRY2O43597 315 aa11.09□□□□□ -0.63
CRTC3-210ENST00000560927 FGF6P10767 208 aa11.09□□□□□ -0.63
CRTC3-210ENST00000560927 USMG5Q96IX5 58 aa11.09□□□□□ -0.63
CRTC3-210ENST00000560927 DKK2Q9UBU2 259 aa11.09□□□□□ -0.63
CRTC3-210ENST00000560927 UFC1Q9Y3C8 167 aa11.09□□□□□ -0.63
CRTC3-210ENST00000560927 CCL25O15444 150 aa11.09□□□□□ -0.63
CRTC3-210ENST00000560927 RPL11P62913 178 aaKnown RBP11.09□□□□□ -0.63
CRTC3-210ENST00000560927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.64
CRTC3-210ENST00000560927 F6UB75 175 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 ZFAND2AQ8N6M9 145 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 NPFFR1Q9GZQ6 430 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.64
CRTC3-210ENST00000560927 H3BUA1 57 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 EDN2P20800 178 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 TMEM95Q3KNT9 176 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 TM4SF20Q53R12 229 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 SPANXN1Q5VSR9 72 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 C12orf54Q6X4T0 127 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 OR2K2Q8NGT1 345 aa11.08□□□□□ -0.64
CRTC3-210ENST00000560927 IGLV2-18A0A075B6J9 118 aa11.07□□□□□ -0.64
CRTC3-210ENST00000560927 BRI3O95415 125 aa11.07□□□□□ -0.64
CRTC3-210ENST00000560927 FCER1GP30273 86 aa11.07□□□□□ -0.64
CRTC3-210ENST00000560927 TAX1BP3O14907 124 aa11.07□□□□□ -0.64
CRTC3-210ENST00000560927 IGLV1-40P01703 118 aa11.07□□□□□ -0.64
CRTC3-210ENST00000560927 KIR3DS1Q14943 382 aa11.07□□□□□ -0.64
CRTC3-210ENST00000560927 NRACQ8N912 160 aa11.07□□□□□ -0.64
CRTC3-210ENST00000560927 CSPG4Q6UVK1 2322 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 OR10J6PQ8NGY7 276 aa11.06□□□□□ -0.64
CRTC3-210ENST00000560927 TMEM158Q8WZ71 300 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms