RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 ARPC5O15511 151 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 NUDT3O95989 172 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 GCHFRP30047 84 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 SERF2P84101 59 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 ZNF726P1Q15940 193 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 ANXA2RQ3ZCQ2 193 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 MUC21Q5SSG8 566 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 CMTM2Q8TAZ6 248 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 RXFP4Q8TDU9 374 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 TVP23CQ96ET8 276 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 TMPRSS5Q9H3S3 457 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 DNAH17Q9UFH2 4485 aa8.15□□□□□ -1.1
RABGGTA-216ENST00000560243 MUC4Q99102 2169 aa8.15□□□□□ -1.11
RABGGTA-216ENST00000560243 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 BORCS7-ASMTA0A0B4J1R7 106 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 TRBV7-9A0A0J9YWB2 115 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 OR5I1Q13606 314 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 ZNF680Q8NEM1 530 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 SUN5Q8TC36 379 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 GNPNAT1Q96EK6 184 aaPredicted RBP8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 SGK494Q96LW2 274 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
RABGGTA-216ENST00000560243 TRAV26-1A0A087WT03 109 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 TRGV1A0A0A0MS02 117 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 A0A0J9YY99 117 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 GGTLC3B5MD39 225 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 MBP02144 154 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 TCL1AP56279 114 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 RNF212Q495C1 297 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 FAM74A1Q5RGS3 127 aa8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 ACTR3CQ9C0K3 210 aaPredicted RBP8.13□□□□□ -1.11
RABGGTA-216ENST00000560243 TRGV2A0A075B6R0 118 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 F6UZH7 168 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 SPINK4O60575 86 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 CXorf1O96002 111 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 IBA57Q5T440 356 aaKnown RBP8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 Q6AWC8 147 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 OR11H4Q8NGC9 324 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 TMED6Q8WW62 240 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 ST6GAL2Q96JF0 529 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 MRPL16Q9NX20 251 aaKnown RBP8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 MDFICQ9P1T7 246 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 LENEPQ9Y5L5 61 aa8.12□□□□□ -1.11
RABGGTA-216ENST00000560243 TCRAP04437 139 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 FGF8P55075 233 aaPredicted RBP8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 SUMO1P63165 101 aaKnown RBP8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 Q6ZR54 194 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 IQCF2Q8IXL9 164 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 ARL6IP6Q8N6S5 226 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 C5orf17Q8NAS9 161 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 ARPC5LQ9BPX5 153 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 ATG101Q9BSB4 218 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 TREM1Q9NP99 234 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 NAGKQ9UJ70 344 aa8.11□□□□□ -1.11
RABGGTA-216ENST00000560243 RTL8CO15255 209 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 IGLV2-11P01706 119 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 IGHV3-53P01767 116 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 TMEM183BQ1AE95 376 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 LGALS9BQ3B8N2 356 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 TMEM183AQ8IXX5 376 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 VSIG2Q96IQ7 327 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 C8orf49Q96NF6 230 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 TMEM167BQ9NRX6 74 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 LINC00588Q9Y4M8 146 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 PKHD1P08F94 4074 aa8.1□□□□□ -1.11
RABGGTA-216ENST00000560243 CTXND1A0A1B0GTU2 59 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 TAAR5O14804 337 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 GNRH2O43555 120 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 ZNF80P51504 273 aaPredicted RBP8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 UBE2G2P60604 165 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 ZNF415Q09FC8 603 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 AKR1C8PQ5T2L2 129 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 FAM159AQ6UWV7 190 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 KCNRGQ8N5I3 272 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 ZNRF2Q8NHG8 242 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 C11orf21Q9P2W6 132 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 EPDR1Q9UM22 224 aa8.09□□□□□ -1.11
RABGGTA-216ENST00000560243 FHITP49789 147 aa8.08□□□□□ -1.12
RABGGTA-216ENST00000560243 TDRG1Q3Y452 100 aa8.08□□□□□ -1.12
RABGGTA-216ENST00000560243 LINC00479Q96M42 142 aa8.08□□□□□ -1.12
RABGGTA-216ENST00000560243 PSG8Q9UQ74 426 aa8.08□□□□□ -1.12
RABGGTA-216ENST00000560243 PKD1P98161 4303 aa8.08□□□□□ -1.12
RABGGTA-216ENST00000560243 TRAV34A0A0B4J273 112 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 TRAV21A0A0B4J279 112 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 IGHV3-16A0A0C4DH30 117 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 SERTM2A0A1B0GWG4 89 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 A0A1W2PRE2 83 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 MAP1LC3B2A6NCE7 125 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 H3BNG1 76 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 TYMSP04818 313 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 CCL18P55774 89 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 FLI1Q01543 452 aaPredicted RBP8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 ZNF345Q14585 488 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 ESRGQ1W209 222 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 PRNTQ86SH4 94 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 CYB561D1Q8N8Q1 229 aa8.07□□□□□ -1.12
RABGGTA-216ENST00000560243 MAP1LC3BQ9GZQ8 125 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms