RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 ZNF726P1Q15940 193 aa9.26□□□□□ -0.93
SMAD3-213ENST00000560175 SSX7Q7RTT5 188 aa9.26□□□□□ -0.93
SMAD3-213ENST00000560175 Q8TAT8 98 aa9.26□□□□□ -0.93
SMAD3-213ENST00000560175 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
SMAD3-213ENST00000560175 GSN-AS1Q9NRJ2 163 aa9.26□□□□□ -0.93
SMAD3-213ENST00000560175 FAT2Q9NYQ8 4349 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 IGHV1OR15-1A0A075B7D0 117 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 SERTM2A0A1B0GWG4 89 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 SPINK4O60575 86 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 CXorf1O96002 111 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 TCL1AP56279 114 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 ZNF345Q14585 488 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 KCNRGQ8N5I3 272 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 OR11H4Q8NGC9 324 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 CMTM2Q8TAZ6 248 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 TVP23CQ96ET8 276 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 HYLS1Q96M11 299 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 TMEM167BQ9NRX6 74 aa9.25□□□□□ -0.93
SMAD3-213ENST00000560175 BIRC6Q9NR09 4857 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 F5H768 121 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 H3BNG1 76 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 ARPC5O15511 151 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 FAM3BP58499 235 aaPredicted RBP9.24□□□□□ -0.93
SMAD3-213ENST00000560175 LGALS9BQ3B8N2 356 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 Q6ZTI0 123 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 C5orf17Q8NAS9 161 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 KLF12Q9Y4X4 402 aa9.24□□□□□ -0.93
SMAD3-213ENST00000560175 CTXND1A0A1B0GTU2 59 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 A0A1W2PRE2 83 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 GAGE12BA1L429 117 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 SMLR1H3BR10 107 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 RGS13O14921 159 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 GAGE7O76087 117 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 IGLV2-11P01706 119 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 TCRAP04437 139 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 HOXA5P20719 270 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
SMAD3-213ENST00000560175 HECTD4Q9Y4D8 3996 aa9.22□□□□□ -0.93
SMAD3-213ENST00000560175 TRAV8-1A0A0A6YYK1 113 aa9.22□□□□□ -0.93
SMAD3-213ENST00000560175 GGTLC3B5MD39 225 aa9.22□□□□□ -0.93
SMAD3-213ENST00000560175 SUMO1P63165 101 aaKnown RBP9.22□□□□□ -0.93
SMAD3-213ENST00000560175 GNG5P63218 68 aa9.22□□□□□ -0.93
SMAD3-213ENST00000560175 Q6ZR54 194 aa9.22□□□□□ -0.93
SMAD3-213ENST00000560175 A0A0D9SG52 128 aa9.21□□□□□ -0.94
SMAD3-213ENST00000560175 FBLL1A6NHQ2 334 aaKnown RBP9.21□□□□□ -0.94
SMAD3-213ENST00000560175 ARPC5LQ9BPX5 153 aa9.21□□□□□ -0.94
SMAD3-213ENST00000560175 TREM1Q9NP99 234 aa9.21□□□□□ -0.94
SMAD3-213ENST00000560175 TRAV21A0A0B4J279 112 aa9.2□□□□□ -0.94
SMAD3-213ENST00000560175 SEC11BP0C7V7 166 aa9.2□□□□□ -0.94
SMAD3-213ENST00000560175 AKR1C8PQ5T2L2 129 aa9.2□□□□□ -0.94
SMAD3-213ENST00000560175 RASL10AQ92737 203 aa9.2□□□□□ -0.94
SMAD3-213ENST00000560175 SPXQ9BT56 116 aa9.2□□□□□ -0.94
SMAD3-213ENST00000560175 NKX6-2Q9C056 277 aaPredicted RBP9.2□□□□□ -0.94
SMAD3-213ENST00000560175 TMPRSS5Q9H3S3 457 aa9.2□□□□□ -0.94
SMAD3-213ENST00000560175 MDFICQ9P1T7 246 aa9.2□□□□□ -0.94
SMAD3-213ENST00000560175 TRAV26-1A0A087WT03 109 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 TRGV1A0A0A0MS02 117 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 ZNF415Q09FC8 603 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 OR5I1Q13606 314 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 FAM159AQ6UWV7 190 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 TMEM75Q8N9X5 138 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 VSIG2Q96IQ7 327 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 ATG101Q9BSB4 218 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 RPH3ALQ9UNE2 315 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 PSG8Q9UQ74 426 aa9.19□□□□□ -0.94
SMAD3-213ENST00000560175 TRGV11A0A075B6L2 103 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 FAM74A7A6NL05 159 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 K7EQM0 130 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 ZNF80P51504 273 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-213ENST00000560175 FLI1Q01543 452 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-213ENST00000560175 MUC21Q5SSG8 566 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 IQCF2Q8IXL9 164 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 CYB561D1Q8N8Q1 229 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 ZNRF2Q8NHG8 242 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 MBD3L1Q8WWY6 194 aa9.18□□□□□ -0.94
SMAD3-213ENST00000560175 TRGV2A0A075B6R0 118 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 UMAD1C9J7I0 102 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 GNRH2O43555 120 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 NUDT3O95989 172 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 FHITP49789 147 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 FHL2Q14192 279 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 Q6ZNX1 250 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 COX8CQ7Z4L0 72 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 UBE2DNLQ8IWF7 75 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 KCNS1Q96KK3 526 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 SGK494Q96LW2 274 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 C11orf21Q9P2W6 132 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 PKD1P98161 4303 aa9.17□□□□□ -0.94
SMAD3-213ENST00000560175 MAP1LC3B2A6NCE7 125 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 RTL8CO15255 209 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 BCL2L11O43521 198 aa9.16□□□□□ -0.94
SMAD3-213ENST00000560175 FGF8P55075 233 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-213ENST00000560175 CCL18P55774 89 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms