RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, human

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-222	ENST00000560131	NCBP2L	A6PVI3	153 aa	Known RBP	4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	C16orf97	H3BN30	126 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131		K7ERJ3	54 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	TIMM8A	O60220	97 aa	Predicted RBP	4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	NPY	P01303	97 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	MT-ATP8	P03928	68 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	IL4	P05112	153 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	ZNF688	P0C7X2	276 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	SLC25A16	P16260	332 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	CKS2	P33552	79 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	CRIP1	P50238	77 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	ATP5G2	Q06055	141 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	EDDM3A	Q14507	147 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	ZC2HC1B	Q5TFG8	222 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	GUSBP11	Q6P575	273 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	LYZL1	Q6UWQ5	148 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131		Q6ZT83	130 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	GOLT1A	Q6ZVE7	132 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	PRNT	Q86SH4	94 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	AMN1	Q8IY45	258 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	TEX29	Q8N6K0	151 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	FLYWCH2	Q96CP2	140 aa	Known RBP	4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	SHANK2-AS3	Q9BTD1	123 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	TTTY12	Q9BZ98	90 aa		4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	F11R	Q9Y624	299 aa	Known RBP	4.01	□□□□□ -1.77
TPM1-222	ENST00000560131	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4	□□□□□ -1.77
TPM1-222	ENST00000560131		H3BRN7	92 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	MRPS12	O15235	138 aa	Known RBP	4	□□□□□ -1.77
TPM1-222	ENST00000560131	IGLV2-23	P01705	113 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	IGHV3-13	P01766	116 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	IGHG3	P01860	377 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	IGKV1-16	P04430	117 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	IGHV1-2	P23083	117 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	LEP	P41159	167 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	INSL3	P51460	131 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	KRTAP10-11	P60412	298 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	SRSF9	Q13242	221 aa	Known RBP eCLIP	4	□□□□□ -1.77
TPM1-222	ENST00000560131	LY6D	Q14210	128 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	VMA21	Q3ZAQ7	101 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	ZNF672	Q499Z4	452 aa	Predicted RBP	4	□□□□□ -1.77
TPM1-222	ENST00000560131	NFE4	Q86UQ8	179 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	RNF185	Q96GF1	192 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	CARD19	Q96LW7	228 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	DUX5	Q96PT3	197 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	HIST1H4G	Q99525	98 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	TMEM126A	Q9H061	195 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	MRPL36	Q9P0J6	103 aa	Known RBP	4	□□□□□ -1.77
TPM1-222	ENST00000560131	PCNX2	A6NKB5	2137 aa		4	□□□□□ -1.77
TPM1-222	ENST00000560131	TNC	P24821	2201 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	IGHV4-4	A0A075B6R2	117 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	IGHV4-61	A0A0C4DH41	118 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	LOC389332	A0A1B0GUA5	103 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	TMEM213	A2RRL7	107 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	DNAJC9-AS1	A6NH13	148 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131		A8MWV9	139 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	PRAC2	D3DTV9	90 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131		F8VRH5	84 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131		H7C1H1	209 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	SH2D1A	O60880	128 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	TSHB	P01222	138 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	IGHV4-59	P01825	116 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	RBP4	P02753	201 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	CRYGB	P07316	175 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	PRSS1	P07477	247 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	CD7	P09564	240 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	ORM2	P19652	201 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	RPL13A	P40429	203 aa	Known RBP	3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	MAGEA5	P43359	124 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	NDUFV3	P56181	108 aa	Known RBP	3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	DSCR9	P59020	149 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	KRTAP10-7	P60409	375 aa	Predicted RBP	3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	RPL32	P62910	135 aa	Known RBP	3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	MRGPRG-AS1	Q2M3A8	158 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	TEX36	Q5VZQ5	186 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	KRTAP5-11	Q6L8G4	156 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	DEFB119	Q8N690	84 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	MYOZ3	Q8TDC0	251 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	RNF5	Q99942	180 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	FOXC2	Q99958	501 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	CACNA1E	Q15878	2313 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	MYO9B	Q13459	2157 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	SDK2	Q58EX2	2172 aa		3.99	□□□□□ -1.77
TPM1-222	ENST00000560131	COL27A1	Q8IZC6	1860 aa	Predicted RBP	3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	PI4KA	P42356	2102 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	DOCK10	Q96BY6	2186 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	IGLV3-9	A0A075B6K5	115 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131		A0A087WZ39	114 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	TRAV8-1	A0A0A6YYK1	113 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	FAM240A	A0A1B0GVK7	77 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	EPOP	A6NHQ4	379 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	FABP5P3	A8MUU1	101 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131		E7EUB6	86 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	FCN3	O75636	299 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	CECR9	P0C854	216 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	LAGE3	Q14657	143 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	SPINK14	Q6IE38	97 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	AMTN	Q6UX39	209 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	GTSCR1	Q86UQ5	136 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	MDS2	Q8NDY4	140 aa		3.98	□□□□□ -1.77
TPM1-222	ENST00000560131	GAFA1	Q96PS6	74 aa		3.98	□□□□□ -1.77

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