RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 IZUMO2Q6UXV1 221 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 FP248Q71RG6 208 aaPredicted RBP1.66□□□□□ -2.14
SPG11-218ENST00000559754 CLECL1Q8IZS7 167 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 Q8N2B8 174 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 OTOSQ8NHW6 89 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 SAR1AQ9NR31 198 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 MPC1Q9Y5U8 109 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 UHRF1BP1LA0JNW5 1464 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 ADGRB1O14514 1584 aa1.66□□□□□ -2.14
SPG11-218ENST00000559754 MUC4Q99102 2169 aa1.65□□□□□ -2.14
SPG11-218ENST00000559754 ANK1P16157 1881 aa1.65□□□□□ -2.14
SPG11-218ENST00000559754 TRPM7Q96QT4 1865 aa1.65□□□□□ -2.14
SPG11-218ENST00000559754 DIDO1Q9BTC0 2240 aaKnown RBP1.65□□□□□ -2.15
SPG11-218ENST00000559754 C9orf170A2RU37 121 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 A6NN06 94 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 IFITM5A6NNB3 132 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 CDC42EP2O14613 210 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 APODP05090 189 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 CNBPP62633 177 aaKnown RBP1.65□□□□□ -2.15
SPG11-218ENST00000559754 CCSMST1Q4G0I0 132 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 CLLU1Q5K131 121 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 SCIMPQ6UWF3 145 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 CASC2Q6XLA1 102 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 FAM19A2Q8N3H0 131 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 Q8TAT8 98 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 CIB3Q96Q77 187 aaPredicted RBP1.65□□□□□ -2.15
SPG11-218ENST00000559754 SDF2Q99470 211 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 LSM2Q9Y333 95 aaKnown RBP1.65□□□□□ -2.15
SPG11-218ENST00000559754 COL5A3P25940 1745 aaPredicted RBP1.65□□□□□ -2.15
SPG11-218ENST00000559754 NAIPQ13075 1403 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 ERBINQ96RT1 1412 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 GBF1Q92538 1859 aa1.65□□□□□ -2.15
SPG11-218ENST00000559754 RTTNQ86VV8 2226 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 FN1P02751 2386 aaKnown RBP1.64□□□□□ -2.15
SPG11-218ENST00000559754 SIP14410 1827 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 IGHV1-24A0A0C4DH33 117 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 C3orf85A0A1B0GTC6 90 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 M0R2P5 195 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 CD2P06729 351 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 S100PP25815 95 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 C10orf55Q5SWW7 151 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 FOXI2Q6ZQN5 318 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 FREM3P0C091 2139 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 AKAP11Q9UKA4 1901 aa1.64□□□□□ -2.15
SPG11-218ENST00000559754 MBD5Q9P267 1494 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 EML5Q05BV3 1969 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 HEATR1Q9H583 2144 aaKnown RBP1.63□□□□□ -2.15
SPG11-218ENST00000559754 A0A0G2JMM0 328 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 A0A1W2PPB8 328 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 KIR3DP1A8MWS1 328 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 J3QRE1 110 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 EDF1O60869 148 aaKnown RBP1.63□□□□□ -2.15
SPG11-218ENST00000559754 HYPMO75409 117 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 PYYP10082 97 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 FGF7P21781 194 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 COA5Q86WW8 74 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 OR10AG1Q8NH19 301 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 ATP6V0E2Q8NHE4 81 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 PATE1Q8WXA2 126 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 SMIM7Q9BQ49 75 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 TMEM106BQ9NUM4 274 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 FGD6Q6ZV73 1430 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 GPR98Q8WXG9 6306 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 ICE1Q9Y2F5 2266 aa1.63□□□□□ -2.15
SPG11-218ENST00000559754 RP1L1Q8IWN7 2480 aaPredicted RBP1.62□□□□□ -2.15
SPG11-218ENST00000559754 ALPK3Q96L96 1907 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 TRBV6-8A0A0A6YYG3 113 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 ZNF736B4DX44 427 aaPredicted RBP1.62□□□□□ -2.15
SPG11-218ENST00000559754 RNASE3P12724 160 aaKnown RBP1.62□□□□□ -2.15
SPG11-218ENST00000559754 MIR22HGQ0VDD5 57 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 LINC01545Q5VT33 79 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 ATP11AUNQ6ZP68 121 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 GKN2Q86XP6 184 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 LINC00052Q96N35 136 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 NAA38Q9BRA0 125 aaKnown RBP1.62□□□□□ -2.15
SPG11-218ENST00000559754 ORMDL1Q9P0S3 153 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 PLXNA2O75051 1894 aa1.62□□□□□ -2.15
SPG11-218ENST00000559754 CUL7Q14999 1698 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 FREM1Q5H8C1 2179 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 LOC107984156A0A0G2JMH3 177 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 BBIP1A8MTZ0 92 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 CCL16O15467 120 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 COX7CP15954 63 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 ZNF25P17030 456 aaPredicted RBP1.61□□□□□ -2.15
SPG11-218ENST00000559754 BTG2P78543 158 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 MRPS10P82664 201 aaKnown RBP1.61□□□□□ -2.15
SPG11-218ENST00000559754 OCIAD2Q56VL3 154 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 TEX261Q6UWH6 196 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 Q6ZRN7 208 aaPredicted RBP1.61□□□□□ -2.15
SPG11-218ENST00000559754 ZCCHC23Q6ZST2 131 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 Q6ZUT4 128 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 ARL17AQ8IVW1 177 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.61□□□□□ -2.15
SPG11-218ENST00000559754 DPH3Q96FX2 82 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 GNG8Q9UK08 70 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 PTPRDP23468 1912 aa1.61□□□□□ -2.15
SPG11-218ENST00000559754 BAZ2BQ9UIF8 2168 aaKnown RBP1.61□□□□□ -2.15
SPG11-218ENST00000559754 ALPK2Q86TB3 2170 aa1.6□□□□□ -2.15
SPG11-218ENST00000559754 TRAV12-2A0A075B6T6 113 aa1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms