RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 LINC00479Q96M42 142 aa13.87□□□□□ -0.19
SHF-205ENST00000559566 F6UZH7 168 aa13.86□□□□□ -0.19
SHF-205ENST00000559566 DPPA3Q6W0C5 159 aa13.86□□□□□ -0.19
SHF-205ENST00000559566 TMEM263Q8WUH6 116 aaKnown RBP13.86□□□□□ -0.19
SHF-205ENST00000559566 C16orf74Q96GX8 76 aa13.86□□□□□ -0.19
SHF-205ENST00000559566 PYGO2Q9BRQ0 406 aa13.86□□□□□ -0.19
SHF-205ENST00000559566 TP53TG3Q9ULZ0 132 aa13.86□□□□□ -0.19
SHF-205ENST00000559566 BOLA1Q9Y3E2 137 aa13.86□□□□□ -0.19
SHF-205ENST00000559566 LENEPQ9Y5L5 61 aa13.86□□□□□ -0.19
SHF-205ENST00000559566 HYDINQ4G0P3 5121 aa13.85□□□□□ -0.19
SHF-205ENST00000559566 TRAV34A0A0B4J273 112 aa13.85□□□□□ -0.19
SHF-205ENST00000559566 ATP5G3P48201 142 aa13.85□□□□□ -0.19
SHF-205ENST00000559566 CCDC28AQ8IWP9 274 aa13.85□□□□□ -0.19
SHF-205ENST00000559566 TENM2Q9NT68 2774 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 TRAV10A0A0B4J240 114 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 H2AFB1P0C5Y9 115 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 SULT1A2P50226 295 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 CCL20P78556 96 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 CYB561D1Q8N8Q1 229 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 C11orf72Q8NBR9 251 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 C8orf49Q96NF6 230 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 LINC00467Q9BRT7 94 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 ATG101Q9BSB4 218 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 NOP10Q9NPE3 64 aaKnown RBP13.84□□□□□ -0.19
SHF-205ENST00000559566 PSG8Q9UQ74 426 aa13.84□□□□□ -0.19
SHF-205ENST00000559566 LCE6AA0A183 80 aa13.83□□□□□ -0.2
SHF-205ENST00000559566 SERTM2A0A1B0GWG4 89 aa13.83□□□□□ -0.2
SHF-205ENST00000559566 PAGE4O60829 102 aa13.83□□□□□ -0.2
SHF-205ENST00000559566 MUC21Q5SSG8 566 aa13.83□□□□□ -0.2
SHF-205ENST00000559566 Q6AWC8 147 aa13.83□□□□□ -0.2
SHF-205ENST00000559566 ZNF493Q6ZR52 646 aa13.83□□□□□ -0.2
SHF-205ENST00000559566 TREM1Q9NP99 234 aa13.83□□□□□ -0.2
SHF-205ENST00000559566 KLK5Q9Y337 293 aaPredicted RBP13.83□□□□□ -0.2
SHF-205ENST00000559566 DEFB131BA0A096LNP1 70 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 LYRM9A8MSI8 78 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 C11orf94C9JXX5 98 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 PEX7O00628 323 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 IFNA7P01567 189 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 ZNF80P51504 273 aaPredicted RBP13.82□□□□□ -0.2
SHF-205ENST00000559566 FLI1Q01543 452 aaPredicted RBP13.82□□□□□ -0.2
SHF-205ENST00000559566 PRNTQ86SH4 94 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 EIF4E3Q8N5X7 224 aaKnown RBP13.82□□□□□ -0.2
SHF-205ENST00000559566 TMEM75Q8N9X5 138 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 C2CD4CQ8TF44 421 aa13.82□□□□□ -0.2
SHF-205ENST00000559566 TIMM8BQ9Y5J9 83 aaPredicted RBP13.82□□□□□ -0.2
SHF-205ENST00000559566 IGHV1OR15-1A0A075B7D0 117 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 TEX48A0A1B0GUV7 120 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 DEFB130BP0DP73 79 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 DEFB130AP0DP74 79 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 DAD1P61803 113 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 ANXA2RQ3ZCQ2 193 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 CST9LP1Q5W188 147 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 GSN-AS1Q9NRJ2 163 aa13.81□□□□□ -0.2
SHF-205ENST00000559566 CBY3A6NI87 242 aa13.8□□□□□ -0.2
SHF-205ENST00000559566 IGLL5B9A064 214 aa13.8□□□□□ -0.2
SHF-205ENST00000559566 RGS13O14921 159 aa13.8□□□□□ -0.2
SHF-205ENST00000559566 EIF5AL1Q6IS14 154 aaKnown RBP13.8□□□□□ -0.2
SHF-205ENST00000559566 LINC00612Q8N6U2 182 aa13.8□□□□□ -0.2
SHF-205ENST00000559566 KLF12Q9Y4X4 402 aa13.8□□□□□ -0.2
SHF-205ENST00000559566 K7EQM0 130 aa13.79□□□□□ -0.2
SHF-205ENST00000559566 HTN3P15516 51 aa13.79□□□□□ -0.2
SHF-205ENST00000559566 RAB5CP51148 216 aa13.79□□□□□ -0.2
SHF-205ENST00000559566 NKX6-2Q9C056 277 aaPredicted RBP13.79□□□□□ -0.2
SHF-205ENST00000559566 C11orf21Q9P2W6 132 aa13.79□□□□□ -0.2
SHF-205ENST00000559566 APLNQ9ULZ1 77 aa13.79□□□□□ -0.2
SHF-205ENST00000559566 ARL2-SNX15V9GYD0 113 aa13.79□□□□□ -0.2
SHF-205ENST00000559566 TRAV1-1A0A0B4J248 108 aa13.78□□□□□ -0.2
SHF-205ENST00000559566 ALKAL2Q6UX46 152 aa13.78□□□□□ -0.2
SHF-205ENST00000559566 Q86TA4 180 aa13.78□□□□□ -0.2
SHF-205ENST00000559566 HIST1H2BAQ96A08 127 aa13.78□□□□□ -0.2
SHF-205ENST00000559566 IGHV4-4A0A075B6R2 117 aa13.77□□□□□ -0.21
SHF-205ENST00000559566 SNURFLB1AK76 121 aa13.77□□□□□ -0.21
SHF-205ENST00000559566 TCL1AP56279 114 aa13.77□□□□□ -0.21
SHF-205ENST00000559566 DAZ2Q13117 558 aaKnown RBP13.77□□□□□ -0.21
SHF-205ENST00000559566 Q6ZTI0 123 aa13.77□□□□□ -0.21
SHF-205ENST00000559566 MDFICQ9P1T7 246 aa13.77□□□□□ -0.21
SHF-205ENST00000559566 NAGKQ9UJ70 344 aa13.77□□□□□ -0.21
SHF-205ENST00000559566 TRAV21A0A0B4J279 112 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 SCO2A0A1W2PP80 73 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GAGE12BA1L429 117 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GAGE7O76087 117 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GCGP01275 180 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GAGE12FP0CL80 117 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GAGE12GP0CL81 117 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GAGE12IP0CL82 117 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 ZNF680Q8NEM1 530 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 LINC00476Q8WZB0 136 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 NDFIP1Q9BT67 221 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GNG13Q9P2W3 67 aa13.76□□□□□ -0.21
SHF-205ENST00000559566 GNRH2O43555 120 aa13.75□□□□□ -0.21
SHF-205ENST00000559566 TMEM183BQ1AE95 376 aa13.75□□□□□ -0.21
SHF-205ENST00000559566 IBA57Q5T440 356 aaKnown RBP13.75□□□□□ -0.21
SHF-205ENST00000559566 TMEM183AQ8IXX5 376 aa13.75□□□□□ -0.21
SHF-205ENST00000559566 VPS13DQ5THJ4 4388 aa13.75□□□□□ -0.21
SHF-205ENST00000559566 TDRG1Q3Y452 100 aa13.74□□□□□ -0.21
SHF-205ENST00000559566 SMUG1Q53HV7 270 aa13.74□□□□□ -0.21
SHF-205ENST00000559566 FBLL1A6NHQ2 334 aaKnown RBP13.73□□□□□ -0.21
SHF-205ENST00000559566 SPINK4O60575 86 aa13.73□□□□□ -0.21
SHF-205ENST00000559566 TYMSP04818 313 aa13.73□□□□□ -0.21
SHF-205ENST00000559566 AKR1C3P42330 323 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms