RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CDKN1BP46527 198 aa13.28□□□□□ -0.28
CLPX-203ENST00000558958 KIR3DS1Q14943 382 aa13.28□□□□□ -0.28
CLPX-203ENST00000558958 SPINK13Q1W4C9 94 aa13.28□□□□□ -0.28
CLPX-203ENST00000558958 PRR9Q5T870 116 aa13.28□□□□□ -0.28
CLPX-203ENST00000558958 J3KRW8 73 aa13.27□□□□□ -0.29
CLPX-203ENST00000558958 ATP6V1G1O75348 118 aa13.27□□□□□ -0.29
CLPX-203ENST00000558958 GPX1P07203 203 aa13.27□□□□□ -0.29
CLPX-203ENST00000558958 RPL35AP18077 110 aaKnown RBP13.27□□□□□ -0.29
CLPX-203ENST00000558958 ZNF80P51504 273 aaPredicted RBP13.27□□□□□ -0.29
CLPX-203ENST00000558958 FXYD7P58549 80 aa13.27□□□□□ -0.29
CLPX-203ENST00000558958 NUTF2P61970 127 aaKnown RBP13.27□□□□□ -0.29
CLPX-203ENST00000558958 PNRC1Q12796 327 aaPredicted RBP13.27□□□□□ -0.29
CLPX-203ENST00000558958 OR5I1Q13606 314 aa13.27□□□□□ -0.29
CLPX-203ENST00000558958 ADIRFQ15847 76 aa13.27□□□□□ -0.29
CLPX-203ENST00000558958 APOC3P02656 99 aa13.26□□□□□ -0.29
CLPX-203ENST00000558958 IGHV4-30-4P0DP06 118 aa13.26□□□□□ -0.29
CLPX-203ENST00000558958 CRIP1P50238 77 aa13.26□□□□□ -0.29
CLPX-203ENST00000558958 TUBA4BQ9H853 241 aa13.26□□□□□ -0.29
CLPX-203ENST00000558958 TRAV12-2A0A075B6T6 113 aa13.25□□□□□ -0.29
CLPX-203ENST00000558958 CRXO43186 299 aaPredicted RBP13.25□□□□□ -0.29
CLPX-203ENST00000558958 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
CLPX-203ENST00000558958 PRR27Q6MZM9 219 aa13.25□□□□□ -0.29
CLPX-203ENST00000558958 MORN3Q6PF18 240 aaPredicted RBP13.25□□□□□ -0.29
CLPX-203ENST00000558958 LINC00322Q6ZN03 302 aaPredicted RBP13.25□□□□□ -0.29
CLPX-203ENST00000558958 BIN3Q9NQY0 253 aa13.25□□□□□ -0.29
CLPX-203ENST00000558958 A8MZ25 164 aa13.24□□□□□ -0.29
CLPX-203ENST00000558958 AMBPP02760 352 aa13.24□□□□□ -0.29
CLPX-203ENST00000558958 GIG44P09565 113 aaPredicted RBP13.24□□□□□ -0.29
CLPX-203ENST00000558958 BTN1A1Q13410 526 aa13.24□□□□□ -0.29
CLPX-203ENST00000558958 FAM162BQ5T6X4 162 aa13.24□□□□□ -0.29
CLPX-203ENST00000558958 GFI1BQ5VTD9 330 aa13.24□□□□□ -0.29
CLPX-203ENST00000558958 ISOC2Q96AB3 205 aa13.24□□□□□ -0.29
CLPX-203ENST00000558958 LOC102724200A0A096LPH7 203 aaPredicted RBP13.23□□□□□ -0.29
CLPX-203ENST00000558958 C7orf71A4D174 169 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 PFN1P07737 140 aaKnown RBP13.23□□□□□ -0.29
CLPX-203ENST00000558958 Q6AWC8 147 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 SVBPQ8N300 66 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 C19orf71A6NCJ1 209 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 FABP5P3A8MUU1 101 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 M0R036 132 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 SH2D1AO60880 128 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 Q6ZQT7 251 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 XCL2Q9UBD3 114 aa13.23□□□□□ -0.29
CLPX-203ENST00000558958 TRAV12-3A0A0B4J271 114 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 TRAV21A0A0B4J279 112 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 KIR2DL5BA0A0G2JN68 375 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 KIR2DL5BA0A0G2JPC4 375 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 ZNF324O75467 553 aaPredicted RBP13.22□□□□□ -0.29
CLPX-203ENST00000558958 PRB2P02812 416 aaPredicted RBP13.22□□□□□ -0.29
CLPX-203ENST00000558958 FAM231DQ6ZW35 169 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 KIR2DL5AQ8N109 375 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 CLRN3Q8NCR9 226 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 KIR2DL5BQ8NHK3 375 aa13.22□□□□□ -0.29
CLPX-203ENST00000558958 RNASE7Q9H1E1 156 aaKnown RBP13.22□□□□□ -0.29
CLPX-203ENST00000558958 NUDT10Q8NFP7 164 aa13.21□□□□□ -0.3
CLPX-203ENST00000558958 DAZAP1Q96EP5 407 aaKnown RBP13.21□□□□□ -0.3
CLPX-203ENST00000558958 NUDT11Q96G61 164 aa13.21□□□□□ -0.3
CLPX-203ENST00000558958 SFRP2Q96HF1 295 aa13.21□□□□□ -0.3
CLPX-203ENST00000558958 C1QTNF4Q9BXJ3 329 aa13.21□□□□□ -0.3
CLPX-203ENST00000558958 B4DEV8 164 aa13.2□□□□□ -0.3
CLPX-203ENST00000558958 CA1P00915 261 aaPredicted RBP13.2□□□□□ -0.3
CLPX-203ENST00000558958 INSP01308 110 aa13.2□□□□□ -0.3
CLPX-203ENST00000558958 S100A1P23297 94 aa13.2□□□□□ -0.3
CLPX-203ENST00000558958 APOC4P55056 127 aa13.2□□□□□ -0.3
CLPX-203ENST00000558958 ERVFC1-1P60608 527 aa13.2□□□□□ -0.3
CLPX-203ENST00000558958 IBA57Q5T440 356 aaKnown RBP13.2□□□□□ -0.3
CLPX-203ENST00000558958 OSTCQ9NRP0 149 aa13.2□□□□□ -0.3
CLPX-203ENST00000558958 C11orf21Q9P2W6 132 aa13.2□□□□□ -0.3
CLPX-203ENST00000558958 K7EIL1 84 aa13.19□□□□□ -0.3
CLPX-203ENST00000558958 SNAPINO95295 136 aa13.19□□□□□ -0.3
CLPX-203ENST00000558958 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
CLPX-203ENST00000558958 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
CLPX-203ENST00000558958 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
CLPX-203ENST00000558958 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
CLPX-203ENST00000558958 P01737 135 aa13.18□□□□□ -0.3
CLPX-203ENST00000558958 RNF212Q495C1 297 aa13.18□□□□□ -0.3
CLPX-203ENST00000558958 C15orf54Q8N8G6 183 aa13.18□□□□□ -0.3
CLPX-203ENST00000558958 CSNK1G2-AS1Q8NCQ2 148 aa13.18□□□□□ -0.3
CLPX-203ENST00000558958 C7orf77A4D0Y5 90 aa13.17□□□□□ -0.3
CLPX-203ENST00000558958 RHEBQ15382 184 aa13.17□□□□□ -0.3
CLPX-203ENST00000558958 OR10G8Q8NGN5 311 aa13.17□□□□□ -0.3
CLPX-203ENST00000558958 ORM1P02763 201 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 MT-ND4LP03901 98 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 FRMD6-AS1P0C7T7 363 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 LINC01559Q495D7 138 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 C1orf158Q8N1D5 194 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 RPP21Q9H633 154 aaKnown RBP13.16□□□□□ -0.3
CLPX-203ENST00000558958 V9GYV3 84 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 IGKV3D-20A0A0C4DH25 116 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 ZNF705GA8MUZ8 300 aaPredicted RBP13.16□□□□□ -0.3
CLPX-203ENST00000558958 UBE2CO00762 179 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 GATCO43716 136 aaKnown RBP13.16□□□□□ -0.3
CLPX-203ENST00000558958 MUC21Q5SSG8 566 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 OR2D3Q8NGH3 330 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 ANAPC16Q96DE5 110 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 NAGKQ9UJ70 344 aa13.16□□□□□ -0.3
CLPX-203ENST00000558958 TMEM189A5PLL7 270 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 PPP1R2P9O14990 202 aa13.15□□□□□ -0.3
CLPX-203ENST00000558958 RPL19P84098 196 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms