RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 SLC25A5P05141 298 aaKnown RBP8.48□□□□□ -1.05
TPM1-216ENST00000558910 TCTAP57738 103 aa8.48□□□□□ -1.05
TPM1-216ENST00000558910 MUC21Q5SSG8 566 aa8.48□□□□□ -1.05
TPM1-216ENST00000558910 RPL7L1Q6DKI1 246 aaKnown RBP8.48□□□□□ -1.05
TPM1-216ENST00000558910 CMTM2Q8TAZ6 248 aa8.48□□□□□ -1.05
TPM1-216ENST00000558910 RNASE8Q8TDE3 154 aaKnown RBP8.48□□□□□ -1.05
TPM1-216ENST00000558910 TMEM263Q8WUH6 116 aaKnown RBP8.48□□□□□ -1.05
TPM1-216ENST00000558910 GSN-AS1Q9NRJ2 163 aa8.48□□□□□ -1.05
TPM1-216ENST00000558910 TP53TG3Q9ULZ0 132 aa8.48□□□□□ -1.05
TPM1-216ENST00000558910 A0A0J9YY99 117 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 ATP5G1P05496 136 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 ARL14EPLP0DKL9 152 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 ATP5G3P48201 142 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 CDC34P49427 236 aaPredicted RBP8.47□□□□□ -1.05
TPM1-216ENST00000558910 ZNF138P52744 262 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 ZNF266Q14584 549 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 GOLT1AQ6ZVE7 132 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 AQP10Q96PS8 301 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 NAGKQ9UJ70 344 aa8.47□□□□□ -1.05
TPM1-216ENST00000558910 TRGV1A0A0A0MS02 117 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 RNF222A6NCQ9 220 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 KRTAP9-7A8MTY7 169 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 ARPC5O15511 151 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 IGHV3-53P01767 116 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 P0DMU3 169 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 FAM231AP0DMU4 169 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 FAM231CP0DMU5 169 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 OXA1LQ15070 435 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 ZNF493Q6ZR52 646 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 C9orf47Q6ZRZ4 202 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 Q6ZTI0 123 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 POM121L12Q8N7R1 296 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 OR2G3Q8NGZ4 309 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 ODF3Q96PU9 254 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 ZNF492Q9P255 531 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 KLF12Q9Y4X4 402 aa8.46□□□□□ -1.06
TPM1-216ENST00000558910 TRGV2A0A075B6R0 118 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 TRAV8-1A0A0A6YYK1 113 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 BORCS7-ASMTA0A0B4J1R7 106 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 DIRC3C9JPN6 131 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 F6UZH7 168 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 SSX7Q7RTT5 188 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 EIF4E3Q8N5X7 224 aaKnown RBP8.45□□□□□ -1.06
TPM1-216ENST00000558910 ZFAND2AQ8N6M9 145 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 RAB24Q969Q5 203 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 ARPC5LQ9BPX5 153 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 C20orf144Q9BQM9 153 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 PYGO2Q9BRQ0 406 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 ATG101Q9BSB4 218 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 OTORQ9NRC9 128 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 MRPL16Q9NX20 251 aaKnown RBP8.45□□□□□ -1.06
TPM1-216ENST00000558910 TNFSF18Q9UNG2 199 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 DNAH2Q9P225 4427 aa8.45□□□□□ -1.06
TPM1-216ENST00000558910 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
TPM1-216ENST00000558910 KLLNB2CW77 178 aa8.44□□□□□ -1.06
TPM1-216ENST00000558910 ZNF324O75467 553 aaPredicted RBP8.44□□□□□ -1.06
TPM1-216ENST00000558910 FGF8P55075 233 aaPredicted RBP8.44□□□□□ -1.06
TPM1-216ENST00000558910 FAM74A1Q5RGS3 127 aa8.44□□□□□ -1.06
TPM1-216ENST00000558910 PQLC2Q6ZP29 291 aa8.44□□□□□ -1.06
TPM1-216ENST00000558910 FAM19A4Q96LR4 140 aa8.44□□□□□ -1.06
TPM1-216ENST00000558910 ACTR3CQ9C0K3 210 aaPredicted RBP8.44□□□□□ -1.06
TPM1-216ENST00000558910 TMPRSS5Q9H3S3 457 aa8.44□□□□□ -1.06
TPM1-216ENST00000558910 TRAV26-1A0A087WT03 109 aa8.43□□□□□ -1.06
TPM1-216ENST00000558910 GCHFRP30047 84 aa8.43□□□□□ -1.06
TPM1-216ENST00000558910 UBE2G2P60604 165 aa8.43□□□□□ -1.06
TPM1-216ENST00000558910 LYPD1Q8N2G4 141 aa8.43□□□□□ -1.06
TPM1-216ENST00000558910 RXFP4Q8TDU9 374 aa8.43□□□□□ -1.06
TPM1-216ENST00000558910 A0A1B0GV50 99 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 G3V3Q6 166 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 STAG3L2P0CL84 134 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 STAG3L3P0CL85 134 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 CRISP2P16562 243 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 HOXA5P20719 270 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 TMEM183BQ1AE95 376 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 TMEM183AQ8IXX5 376 aa8.42□□□□□ -1.06
TPM1-216ENST00000558910 GNPNAT1Q96EK6 184 aaPredicted RBP8.42□□□□□ -1.06
TPM1-216ENST00000558910 PSMG3Q9BT73 122 aaPredicted RBP8.42□□□□□ -1.06
TPM1-216ENST00000558910 MBP02144 154 aa8.41□□□□□ -1.06
TPM1-216ENST00000558910 SUMO1P63165 101 aaKnown RBP8.41□□□□□ -1.06
TPM1-216ENST00000558910 AKR1C8PQ5T2L2 129 aa8.41□□□□□ -1.06
TPM1-216ENST00000558910 C11orf72Q8NBR9 251 aa8.41□□□□□ -1.06
TPM1-216ENST00000558910 ZNF680Q8NEM1 530 aa8.41□□□□□ -1.06
TPM1-216ENST00000558910 ASB13Q8WXK3 278 aa8.41□□□□□ -1.06
TPM1-216ENST00000558910 FAM210BQ96KR6 192 aa8.41□□□□□ -1.06
TPM1-216ENST00000558910 MDFICQ9P1T7 246 aa8.41□□□□□ -1.06
TPM1-216ENST00000558910 A0A096LPF7 62 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 RBAKDNA6NC62 111 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 GNRH2O43555 120 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 CXorf1O96002 111 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 SERF2P84101 59 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 ZNF726P1Q15940 193 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 FAM159AQ6UWV7 190 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 PRNTQ86SH4 94 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 C15orf53Q8NAA6 179 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 TVP23CQ96ET8 276 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 C8orf49Q96NF6 230 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 TREM1Q9NP99 234 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 PLA2G2DQ9UNK4 145 aa8.4□□□□□ -1.06
TPM1-216ENST00000558910 TRAV34A0A0B4J273 112 aa8.39□□□□□ -1.07
TPM1-216ENST00000558910 IFNA7P01567 189 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms