RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 IGLV4-3A0A075B6K6 122 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 A0A0D9SG52 128 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 OR11H12B2RN74 326 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 ISLRO14498 428 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 BCL2L11O43521 198 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 COX7A2P2O60397 106 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 EIF3GO75821 320 aaKnown RBP eCLIP4.32□□□□□ -1.72
LRRC28-209ENST00000558861 RPL7P18124 248 aaKnown RBP4.32□□□□□ -1.72
LRRC28-209ENST00000558861 M6PRP20645 277 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 DEFB1P60022 68 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 SERF2P84101 59 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 C10orf113Q5VZT2 155 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 Q6ZRG5 221 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 TMUB2Q71RG4 321 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 MIR17HGQ75NE6 70 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 OR8I2Q8N0Y5 310 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 Q8N377 158 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 DEFB125Q8N687 156 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 STXBP6Q8NFX7 210 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 OR1L4Q8NGR5 311 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 SUN5Q8TC36 379 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 FXYD5Q96DB9 178 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 NARS2Q96I59 477 aaKnown RBP4.32□□□□□ -1.72
LRRC28-209ENST00000558861 HYLS1Q96M11 299 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 LYSTQ99698 3801 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 SLC25A22Q9H936 323 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 ZNF331Q9NQX6 463 aaPredicted RBP4.32□□□□□ -1.72
LRRC28-209ENST00000558861 KCNIP2Q9NS61 270 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 RPRMQ9NS64 109 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 ZNF586Q9NXT0 402 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 FUT9Q9Y231 359 aa4.32□□□□□ -1.72
LRRC28-209ENST00000558861 TRBV19A0A075B6N1 114 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 C17orf112F2Z3M2 114 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 ZNF253O75346 499 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 ZNF688P0C7X2 276 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 STAG3L2P0CL84 134 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 STAG3L3P0CL85 134 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 PYYP10082 97 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 HIST1H1EP10412 219 aaKnown RBP4.31□□□□□ -1.72
LRRC28-209ENST00000558861 HLA-DMBP28068 263 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 GALR1P47211 349 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 TFPI2P48307 235 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 PSMB3P49720 205 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 CNN1P51911 297 aaKnown RBP4.31□□□□□ -1.72
LRRC28-209ENST00000558861 NKX2-5P52952 324 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-209ENST00000558861 DEFB131AP59861 70 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 RIGQ13278 110 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 FAM78BQ5VT40 261 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 APRG1Q8IVJ8 170 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 ZNF709Q8N972 641 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 MRAPQ8TCY5 172 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 SCGB1C1Q8TD33 95 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 GNPNAT1Q96EK6 184 aaPredicted RBP4.31□□□□□ -1.72
LRRC28-209ENST00000558861 RCHY1Q96PM5 261 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 B9D2Q9BPU9 175 aa4.31□□□□□ -1.72
LRRC28-209ENST00000558861 MRPL32Q9BYC8 188 aaKnown RBP4.31□□□□□ -1.72
LRRC28-209ENST00000558861 VPS13DQ5THJ4 4388 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 BORCS7-ASMTA0A0B4J1R7 106 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 H3BMM0 161 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 H3BTX0 84 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 DNASE2O00115 360 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-209ENST00000558861 SNRPCP09234 159 aaKnown RBP4.3□□□□□ -1.72
LRRC28-209ENST00000558861 SEC11BP0C7V7 166 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 HLA-DRB4P13762 266 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 MEOX2P50222 304 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 RHOBP62745 196 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 PAFAH1B2P68402 229 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 PDE6HQ13956 83 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 HAGHQ16775 308 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 ACOT6Q3I5F7 207 aaPredicted RBP4.3□□□□□ -1.72
LRRC28-209ENST00000558861 GDF5OSQ5U4N7 250 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 AMTNQ6UX39 209 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 BPIFA4PQ86YQ2 179 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 SBSPONQ8IVN8 264 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 BAP18Q8IXM2 172 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 RNF182Q8N6D2 247 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 OR10G4Q8NGN3 311 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 OR10G9Q8NGN4 311 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 PPP1R14BQ96C90 147 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 PHYHIPLQ96FC7 376 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 TM2D3Q9BRN9 247 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 HLA-DRB4X5D2U9 266 aa4.3□□□□□ -1.72
LRRC28-209ENST00000558861 KIR2DL5BA0A0G2JN68 375 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 KIR2DL5BA0A0G2JPC4 375 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 A0A0J9YX75 114 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 KANTRA0A1W2PQU2 76 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 KNCNA6PVL3 124 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 F6UB75 175 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 M0R3E3 92 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 MBP02144 154 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 OR10J4P0C629 311 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 NBEAP1P0C6P0 100 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 S100A7P31151 101 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 CDC34P49427 236 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-209ENST00000558861 CMC4P56277 68 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-209ENST00000558861 PSG3Q16557 428 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 GUK1Q16774 197 aa4.29□□□□□ -1.72
LRRC28-209ENST00000558861 TMEM41BQ5BJD5 291 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms