RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 IGHV3-53P01767 116 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 SLC25A5P05141 298 aaKnown RBP6.52□□□□□ -1.37
SPG11-212ENST00000558790 TCL1AP56279 114 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 UBE2MP61081 183 aaKnown RBP6.52□□□□□ -1.37
SPG11-212ENST00000558790 CD300CQ08708 224 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 PYDC2Q56P42 97 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 C10orf113Q5VZT2 155 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 OR10P1Q8NGE3 313 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 MPLKIPQ8TAP9 179 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 ST6GAL2Q96JF0 529 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 MRPL16Q9NX20 251 aaKnown RBP6.52□□□□□ -1.37
SPG11-212ENST00000558790 KLF12Q9Y4X4 402 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 V9GYH0 126 aa6.52□□□□□ -1.37
SPG11-212ENST00000558790 TRAV5A0A0B4J249 113 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 IGLV5-39A0A0G2JS06 123 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 M0R3E3 92 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 TSC22D2O75157 780 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 ERCC8Q13216 396 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 LYPD5Q6UWN5 251 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 WFDC10BQ8IUB3 73 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 EIF4E3Q8N5X7 224 aaKnown RBP6.51□□□□□ -1.37
SPG11-212ENST00000558790 LY96Q9Y6Y9 160 aa6.51□□□□□ -1.37
SPG11-212ENST00000558790 H3BMQ9 156 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 OR4E1P0C645 316 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 CRYBA4P53673 196 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 TMBIM6P55061 237 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 GUK1Q16774 197 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 PRR9Q5T870 116 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 DEDD2Q8WXF8 326 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 MRPL53Q96EL3 112 aaKnown RBP6.5□□□□□ -1.37
SPG11-212ENST00000558790 FAM19A4Q96LR4 140 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 VGLL1Q99990 258 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 BCL7BQ9BQE9 202 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 PRO0255Q9UI72 69 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 TP53TG3Q9ULZ0 132 aa6.5□□□□□ -1.37
SPG11-212ENST00000558790 C7orf66A4D0T2 115 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 ZNF253O75346 499 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 RNASE4P34096 147 aaKnown RBP6.49□□□□□ -1.37
SPG11-212ENST00000558790 CAMLGP49069 296 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 TAS2R30P59541 319 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 MRPL23Q16540 153 aaKnown RBP6.49□□□□□ -1.37
SPG11-212ENST00000558790 IAH1Q2TAA2 248 aaPredicted RBP6.49□□□□□ -1.37
SPG11-212ENST00000558790 IBA57Q5T440 356 aaKnown RBP6.49□□□□□ -1.37
SPG11-212ENST00000558790 MIC13Q5XKP0 118 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 Q6ZQT7 251 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 GGACTQ9BVM4 153 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 FLVCR2Q9UPI3 526 aa6.49□□□□□ -1.37
SPG11-212ENST00000558790 TRBV19A0A075B6N1 114 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 TRAV9-2A0A087WT02 112 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 IGKV2-40A0A087WW87 121 aaPredicted RBP6.48□□□□□ -1.37
SPG11-212ENST00000558790 K7EQD1 137 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 PRAF2O60831 178 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 NOL3O60936 208 aaKnown RBP6.48□□□□□ -1.37
SPG11-212ENST00000558790 MPDU1O75352 247 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 NDUFB6O95139 128 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 NDUFB4O95168 129 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 IGKV2D-40P01614 121 aaPredicted RBP6.48□□□□□ -1.37
SPG11-212ENST00000558790 CRISP2P16562 243 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 NEGR1Q7Z3B1 354 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 NRARPQ7Z6K4 114 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 ZFAND2AQ8N6M9 145 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 AGPAT4-IT1Q9H0P7 198 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 DNAJC4Q9NNZ3 241 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 HHLA3Q9XRX5 114 aa6.48□□□□□ -1.37
SPG11-212ENST00000558790 IGLV5-52A0A0A0MRZ9 124 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 UBE2L5PA0A1B0GUS4 154 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 E5RGE8 158 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 GPX1P07203 203 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 SFTA3P0C7M3 94 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 PYYP10082 97 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 EVI2AP22794 236 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 SRIP30626 198 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 SERTAD4-AS1Q5TG53 156 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 Q6ZRG5 221 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 EXOC3-AS1Q8N2X6 119 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 OR1L4Q8NGR5 311 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 PFDN5Q99471 154 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 GSKIPQ9P0R6 139 aa6.47□□□□□ -1.37
SPG11-212ENST00000558790 IGHV1OR15-1A0A075B7D0 117 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 TRGV4A0A0C4DH28 118 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 LRCOL1A6NCL2 159 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 K7EP13 123 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 CCSO14618 274 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 CST7O76096 145 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 CRYGDP07320 174 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 ZNF415Q09FC8 603 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 SLAQ13239 276 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 PDE6HQ13956 83 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 C9orf47Q6ZRZ4 202 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 Q8TAT8 98 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 BLNKQ8WV28 456 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 ZNF479Q96JC4 524 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 LINC00477Q96M19 166 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 SLC39A9Q9NUM3 307 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 TMEM14CQ9P0S9 112 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 PRELID1Q9Y255 219 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 WDR83OSQ9Y284 106 aa6.46□□□□□ -1.38
SPG11-212ENST00000558790 BTCP35070 178 aa6.45□□□□□ -1.38
SPG11-212ENST00000558790 BAXQ07812 192 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms