RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 WFDC12Q8WWY7 111 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 A0A1W2PRX2 142 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 KLF5Q13887 457 aaPredicted RBP9.75□□□□□ -0.85
SMAD3-207ENST00000558763 PDZD11Q5EBL8 140 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 PGLYRP4Q96LB8 373 aa9.75□□□□□ -0.85
SMAD3-207ENST00000558763 GRIFINA4D1Z8 144 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 ZNF138P52744 262 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 KLHL30-AS1Q8NEE0 82 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 C4orf3Q8WVX3 66 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 ZNF705DP0CH99 300 aaPredicted RBP9.74□□□□□ -0.85
SMAD3-207ENST00000558763 ZNF705BP0CI00 300 aaPredicted RBP9.74□□□□□ -0.85
SMAD3-207ENST00000558763 SLURP1P55000 103 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 ZNF738Q8NE65 137 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 HIST1H2BLQ99880 126 aa9.74□□□□□ -0.85
SMAD3-207ENST00000558763 COL6A5A8TX70 2615 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 C2orf70A6NJV1 201 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 F2Z2F3 143 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 NUPR1O60356 82 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 S100A8P05109 93 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 HBBP68871 147 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 KIAA1644Q3SXP7 199 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 PRR9Q5T870 116 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 TMEM256Q8N2U0 113 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 NDFIP1Q9BT67 221 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 SSBP4Q9BWG4 385 aaPredicted RBP9.73□□□□□ -0.85
SMAD3-207ENST00000558763 C11orf21Q9P2W6 132 aa9.73□□□□□ -0.85
SMAD3-207ENST00000558763 ARMS2P0C7Q2 107 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 RAB4BP61018 213 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 RPL11P62913 178 aaKnown RBP9.72□□□□□ -0.85
SMAD3-207ENST00000558763 PRR31Q5SQ13 230 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 TMEM78Q5T7P6 136 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 FAM19A4Q96LR4 140 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 TSSC4Q9Y5U2 329 aaPredicted RBP9.72□□□□□ -0.85
SMAD3-207ENST00000558763 SORL1Q92673 2214 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 F6UB75 175 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 AMBPP02760 352 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 IGLC6P0CF74 106 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 CAMPP49913 170 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 Q6ZQT7 251 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 ZFAND2AQ8N6M9 145 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 GATD1Q8NB37 220 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 TMEM158Q8WZ71 300 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 DUX3Q96PT4 197 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 MS4A6AQ9H2W1 248 aa9.72□□□□□ -0.85
SMAD3-207ENST00000558763 STAB1Q9NY15 2570 aa9.71□□□□□ -0.85
SMAD3-207ENST00000558763 TMSB15BA0A087X1C1 80 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 TMEM189A5PLL7 270 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 OVOL1O14753 267 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 APCSP02743 223 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 CRISP2P16562 243 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 Q0VG73 95 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 NSUN5P1Q3KNT7 163 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 OR11H1Q8NG94 326 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 LENEPQ9Y5L5 61 aa9.71□□□□□ -0.86
SMAD3-207ENST00000558763 FABP5P3A8MUU1 101 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 LINC01619G3V211 115 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 FABP4P15090 132 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 BMI1P35226 326 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 CTRLP40313 264 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 Q6AWC8 147 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 IGKV3D-20A0A0C4DH25 116 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 A0A1B0GUT8 65 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 K7EQG2 157 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 SMIM6P0DI80 62 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 ESDP10768 282 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 SRIP30626 198 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 LINC00477Q96M19 166 aa9.7□□□□□ -0.86
SMAD3-207ENST00000558763 AGRNO00468 2067 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 WNK1Q9H4A3 2382 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 ADARB2-AS1A8MUL3 147 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 FHL3Q13643 280 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 SAMD13Q5VXD3 122 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 LYZL1Q6UWQ5 148 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 APRG1Q8IVJ8 170 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 OR1N2Q8NGR9 330 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 C12orf57Q99622 126 aa9.69□□□□□ -0.86
SMAD3-207ENST00000558763 SERF1AO75920 110 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 HIST1H1AQ02539 215 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-207ENST00000558763 PYY3Q5JQD4 70 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 OR10D4PQ8NGN7 298 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 OR10J6PQ8NGY7 276 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 CITED1Q99966 193 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 RPS20P60866 119 aaKnown RBP9.68□□□□□ -0.86
SMAD3-207ENST00000558763 KIR3DS1Q14943 382 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 C18orf32Q8TCD1 76 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 DLX4Q92988 240 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-207ENST00000558763 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 PACRGQ96M98 296 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-207ENST00000558763 RCHY1Q96PM5 261 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 ALKBH7Q9BT30 221 aaPredicted RBP9.68□□□□□ -0.86
SMAD3-207ENST00000558763 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 VWFP04275 2813 aa9.68□□□□□ -0.86
SMAD3-207ENST00000558763 ORM1P02763 201 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 S100A2P29034 98 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 OR10J3Q5JRS4 329 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 C12orf54Q6X4T0 127 aa9.67□□□□□ -0.86
SMAD3-207ENST00000558763 NDUFA11Q86Y39 141 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms