RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SFT2D1Q8WV19 159 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 NOP10Q9NPE3 64 aaKnown RBP11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 EPDR1Q9UM22 224 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 TENM2Q9NT68 2774 aa11.3□□□□□ -0.6
RABGGTA-206ENST00000558649 CBY3A6NI87 242 aa11.29□□□□□ -0.6
RABGGTA-206ENST00000558649 FAM74A7A6NL05 159 aa11.29□□□□□ -0.6
RABGGTA-206ENST00000558649 LYRM9A8MSI8 78 aa11.29□□□□□ -0.6
RABGGTA-206ENST00000558649 ZNF493Q6ZR52 646 aa11.29□□□□□ -0.6
RABGGTA-206ENST00000558649 ARL6IP6Q8N6S5 226 aa11.29□□□□□ -0.6
RABGGTA-206ENST00000558649 TIMM8BQ9Y5J9 83 aaPredicted RBP11.29□□□□□ -0.6
RABGGTA-206ENST00000558649 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 MUC21Q5SSG8 566 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 CST9LP1Q5W188 147 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 DPPA3Q6W0C5 159 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 C9orf62Q8N4C0 152 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 EIF4E3Q8N5X7 224 aaKnown RBP11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 CYB561D1Q8N8Q1 229 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 NDFIP1Q9BT67 221 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 TREM1Q9NP99 234 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 LENEPQ9Y5L5 61 aa11.28□□□□□ -0.6
RABGGTA-206ENST00000558649 H2AFB1P0C5Y9 115 aa11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 EIF5AL1Q6IS14 154 aaKnown RBP11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 PRNTQ86SH4 94 aa11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 SLC51BQ86UW2 128 aa11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 TVP23CQ96ET8 276 aa11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 ATG101Q9BSB4 218 aa11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 NAGKQ9UJ70 344 aa11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 TP53TG3Q9ULZ0 132 aa11.27□□□□□ -0.61
RABGGTA-206ENST00000558649 IGHV4-4A0A075B6R2 117 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 IGHV1OR15-1A0A075B7D0 117 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 TRAV34A0A0B4J273 112 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 LY6G6CO95867 125 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 NKX2-5P52952 324 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 FLI1Q01543 452 aaPredicted RBP11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 ZNF680Q8NEM1 530 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 MBD3L1Q8WWY6 194 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 LINC00479Q96M42 142 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 C8orf49Q96NF6 230 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 GSN-AS1Q9NRJ2 163 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 PSG8Q9UQ74 426 aa11.26□□□□□ -0.61
RABGGTA-206ENST00000558649 PEX7O00628 323 aa11.25□□□□□ -0.61
RABGGTA-206ENST00000558649 PAGE4O60829 102 aa11.25□□□□□ -0.61
RABGGTA-206ENST00000558649 ATP5G3P48201 142 aa11.25□□□□□ -0.61
RABGGTA-206ENST00000558649 Q6AWC8 147 aa11.25□□□□□ -0.61
RABGGTA-206ENST00000558649 TMEM75Q8N9X5 138 aa11.25□□□□□ -0.61
RABGGTA-206ENST00000558649 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
RABGGTA-206ENST00000558649 NKX6-2Q9C056 277 aaPredicted RBP11.25□□□□□ -0.61
RABGGTA-206ENST00000558649 KMT2CQ8NEZ4 4911 aaKnown RBP11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 GAGE7O76087 117 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 IGLV2-11P01706 119 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 ANXA2RQ3ZCQ2 193 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 FAM159AQ6UWV7 190 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 LINC00476Q8WZB0 136 aa11.24□□□□□ -0.61
RABGGTA-206ENST00000558649 PPT1P50897 306 aa11.23□□□□□ -0.61
RABGGTA-206ENST00000558649 RAB5CP51148 216 aa11.23□□□□□ -0.61
RABGGTA-206ENST00000558649 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
RABGGTA-206ENST00000558649 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
RABGGTA-206ENST00000558649 KLF12Q9Y4X4 402 aa11.23□□□□□ -0.61
RABGGTA-206ENST00000558649 TRAV21A0A0B4J279 112 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 GCGP01275 180 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 SULT1A2P50226 295 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 ZNF415Q09FC8 603 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 TMEM183BQ1AE95 376 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 Q6ZTI0 123 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 Q86TA4 180 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 TMEM183AQ8IXX5 376 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 HIST1H2BAQ96A08 127 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 NDUFAF3Q9BU61 184 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 ARL2-SNX15V9GYD0 113 aa11.22□□□□□ -0.61
RABGGTA-206ENST00000558649 TRGV1A0A0A0MS02 117 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 FBLL1A6NHQ2 334 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 F5H768 121 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 ATP5G1P05496 136 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 ZNF80P51504 273 aaPredicted RBP11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 TCL1AP56279 114 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 UBE2G1P62253 170 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 CCL20P78556 96 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 DAZ2Q13117 558 aaKnown RBP11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 SMUG1Q53HV7 270 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 TMEM88Q6PEY1 159 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 GNG13Q9P2W3 67 aa11.21□□□□□ -0.61
RABGGTA-206ENST00000558649 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 TEX46H3BTG2 121 aa11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 AKR1C3P42330 323 aa11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 TCTAP57738 103 aa11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 SAPCD1Q5SSQ6 148 aa11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 IBA57Q5T440 356 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 ALKAL2Q6UX46 152 aa11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 MRPL16Q9NX20 251 aaKnown RBP11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 MDFICQ9P1T7 246 aa11.2□□□□□ -0.62
RABGGTA-206ENST00000558649 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
RABGGTA-206ENST00000558649 SCO2A0A1W2PP80 73 aa11.19□□□□□ -0.62
RABGGTA-206ENST00000558649 LINC00612Q8N6U2 182 aa11.19□□□□□ -0.62
RABGGTA-206ENST00000558649 FMC1Q96HJ9 113 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms