RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TMEM208Q9BTX3 173 aa11.11□□□□□ -0.63
LINC01220-201ENST00000558575 C7orf71A4D174 169 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 IFNA7P01567 189 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 GPX1P07203 203 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 CST9LP1Q5W188 147 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 C20orf144Q9BQM9 153 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 ATG101Q9BSB4 218 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 NKX6-2Q9C056 277 aaPredicted RBP11.1□□□□□ -0.63
LINC01220-201ENST00000558575 LENEPQ9Y5L5 61 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 ARL2-SNX15V9GYD0 113 aa11.1□□□□□ -0.63
LINC01220-201ENST00000558575 PKHD1P08F94 4074 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 TRAV34A0A0B4J273 112 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 SERTM2A0A1B0GWG4 89 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 PLAC8L1A1L4L8 177 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 H7BYZ3 331 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 HBE1P02100 147 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 TAS2R60P59551 318 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 RRN3P1Q2M238 152 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 CYB561D1Q8N8Q1 229 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 KRTAP4-5Q9BYR2 181 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 CELA1Q9UNI1 258 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 PSG8Q9UQ74 426 aa11.09□□□□□ -0.63
LINC01220-201ENST00000558575 LOC102723971A0A1B0GUV8 181 aa11.08□□□□□ -0.64
LINC01220-201ENST00000558575 PEX7O00628 323 aa11.08□□□□□ -0.64
LINC01220-201ENST00000558575 PMS2P11Q13670 270 aa11.08□□□□□ -0.64
LINC01220-201ENST00000558575 HIST1H2BAQ96A08 127 aa11.08□□□□□ -0.64
LINC01220-201ENST00000558575 VPS13DQ5THJ4 4388 aa11.08□□□□□ -0.64
LINC01220-201ENST00000558575 HTN1P15515 57 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 EMP1P54849 157 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 NANOS2P60321 138 aaKnown RBP11.07□□□□□ -0.64
LINC01220-201ENST00000558575 FLI1Q01543 452 aaPredicted RBP11.07□□□□□ -0.64
LINC01220-201ENST00000558575 TMEM75Q8N9X5 138 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 LYPD6BQ8NI32 183 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 C8orf49Q96NF6 230 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 TREM1Q9NP99 234 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 GNG13Q9P2W3 67 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 KLF12Q9Y4X4 402 aa11.07□□□□□ -0.64
LINC01220-201ENST00000558575 PPT1P50897 306 aa11.06□□□□□ -0.64
LINC01220-201ENST00000558575 ZNF80P51504 273 aaPredicted RBP11.06□□□□□ -0.64
LINC01220-201ENST00000558575 Q6AWC8 147 aa11.06□□□□□ -0.64
LINC01220-201ENST00000558575 PRNTQ86SH4 94 aa11.06□□□□□ -0.64
LINC01220-201ENST00000558575 C11orf45Q8TAV5 145 aa11.06□□□□□ -0.64
LINC01220-201ENST00000558575 LINC00467Q9BRT7 94 aa11.06□□□□□ -0.64
LINC01220-201ENST00000558575 NIPSNAP3BQ9BS92 247 aa11.06□□□□□ -0.64
LINC01220-201ENST00000558575 TMEM189A5PLL7 270 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 C11orf94C9JXX5 98 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 F6UZH7 168 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 K7EQM0 130 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 C12orf74Q32Q52 190 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 RNASE8Q8TDE3 154 aaKnown RBP11.05□□□□□ -0.64
LINC01220-201ENST00000558575 C2CD4CQ8TF44 421 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 DKK2Q9UBU2 259 aa11.05□□□□□ -0.64
LINC01220-201ENST00000558575 SCO2A0A1W2PP80 73 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 CXorf65A6NEN9 183 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
LINC01220-201ENST00000558575 BLOC1S1P78537 153 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 TEX261Q6UWH6 196 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 ZNF767PQ75MW2 155 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 TCEAL7Q9BRU2 100 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 MANBALQ9NQG1 85 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
LINC01220-201ENST00000558575 IGHV1OR15-1A0A075B7D0 117 aa11.03□□□□□ -0.64
LINC01220-201ENST00000558575 TEX46H3BTG2 121 aa11.03□□□□□ -0.64
LINC01220-201ENST00000558575 FAM222AQ5U5X8 452 aa11.03□□□□□ -0.64
LINC01220-201ENST00000558575 ZNF493Q6ZR52 646 aa11.03□□□□□ -0.64
LINC01220-201ENST00000558575 ZNF680Q8NEM1 530 aa11.03□□□□□ -0.64
LINC01220-201ENST00000558575 TMEM263Q8WUH6 116 aaKnown RBP11.03□□□□□ -0.64
LINC01220-201ENST00000558575 C11orf21Q9P2W6 132 aa11.03□□□□□ -0.64
LINC01220-201ENST00000558575 TRBV6-1A0A0K0K1D8 114 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 CRIP1P50238 77 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 TMEM183BQ1AE95 376 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 ANXA2RQ3ZCQ2 193 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 MUC21Q5SSG8 566 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 SAPCD1Q5SSQ6 148 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 Q86TA4 180 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 EIF4E3Q8N5X7 224 aaKnown RBP11.02□□□□□ -0.65
LINC01220-201ENST00000558575 C11orf72Q8NBR9 251 aa11.02□□□□□ -0.65
LINC01220-201ENST00000558575 GCGP01275 180 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 BCL2P10415 239 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 Q6ZTC4 211 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 COX8CQ7Z4L0 72 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 PCNPQ8WW12 178 aaKnown RBP11.01□□□□□ -0.65
LINC01220-201ENST00000558575 C11orf52Q96A22 123 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 C16orf74Q96GX8 76 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 FMC1Q96HJ9 113 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 NDFIP1Q9BT67 221 aa11.01□□□□□ -0.65
LINC01220-201ENST00000558575 FAT2Q9NYQ8 4349 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 DNAH6Q9C0G6 4158 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 TRAV21A0A0B4J279 112 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 NUPR2A6NF83 97 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 CBY3A6NI87 242 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 RGS13O14921 159 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 LTAP01374 205 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 MED14OSP0DP75 135 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 AKR1C3P42330 323 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 TDRG1Q3Y452 100 aa11□□□□□ -0.65
LINC01220-201ENST00000558575 SMUG1Q53HV7 270 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms