RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TVP23CQ96ET8 276 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 FAM210AQ96ND0 272 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 LINC01587Q99440 93 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 NEU1Q99519 415 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 C20orf144Q9BQM9 153 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 TCEAL7Q9BRU2 100 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 LENEPQ9Y5L5 61 aa12.6□□□□□ -0.39
TPM1-214ENST00000558544 SCO2A0A1W2PP80 73 aa12.59□□□□□ -0.39
TPM1-214ENST00000558544 F6UZH7 168 aa12.59□□□□□ -0.39
TPM1-214ENST00000558544 TMEM256Q8N2U0 113 aa12.59□□□□□ -0.39
TPM1-214ENST00000558544 NIPSNAP3BQ9BS92 247 aa12.59□□□□□ -0.39
TPM1-214ENST00000558544 ZNF705GA8MUZ8 300 aaPredicted RBP12.58□□□□□ -0.4
TPM1-214ENST00000558544 PRM2P04554 102 aa12.58□□□□□ -0.4
TPM1-214ENST00000558544 BCL2P10415 239 aa12.58□□□□□ -0.4
TPM1-214ENST00000558544 AKR1C3P42330 323 aa12.58□□□□□ -0.4
TPM1-214ENST00000558544 TOR2AQ5JU69 321 aa12.58□□□□□ -0.4
TPM1-214ENST00000558544 UQCC3Q6UW78 93 aa12.58□□□□□ -0.4
TPM1-214ENST00000558544 NDFIP1Q9BT67 221 aa12.58□□□□□ -0.4
TPM1-214ENST00000558544 C11orf68Q9H3H3 251 aaKnown RBP12.58□□□□□ -0.4
TPM1-214ENST00000558544 TREM1Q9NP99 234 aa12.58□□□□□ -0.4
TPM1-214ENST00000558544 SMIM9A6NGZ8 99 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 FBLL1A6NHQ2 334 aaKnown RBP12.57□□□□□ -0.4
TPM1-214ENST00000558544 C9JQL5 133 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 H7BYZ3 331 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 HTN1P15515 57 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 UBE2G1P62253 170 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 RRN3P1Q2M238 152 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 Q6ZQT7 251 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 Q86TA4 180 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 C8orf49Q96NF6 230 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 WWC2-AS2Q96NR7 200 aa12.57□□□□□ -0.4
TPM1-214ENST00000558544 LOC102723971A0A1B0GUV8 181 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 ZNF324O75467 553 aaPredicted RBP12.56□□□□□ -0.4
TPM1-214ENST00000558544 S100A1P23297 94 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 TAS2R60P59551 318 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 MEF2BQ02080 365 aaPredicted RBP12.56□□□□□ -0.4
TPM1-214ENST00000558544 FMC1Q96HJ9 113 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 TXNDC17Q9BRA2 123 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 RBFOX3A6NFN3 312 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 ZNF506Q5JVG8 444 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 C2CD4CQ8TF44 421 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 VAX2Q9UIW0 290 aa12.56□□□□□ -0.4
TPM1-214ENST00000558544 AZU1P20160 251 aa12.55□□□□□ -0.4
TPM1-214ENST00000558544 EMP1P54849 157 aa12.55□□□□□ -0.4
TPM1-214ENST00000558544 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
TPM1-214ENST00000558544 Q6AWC8 147 aa12.55□□□□□ -0.4
TPM1-214ENST00000558544 PYGO2Q9BRQ0 406 aa12.55□□□□□ -0.4
TPM1-214ENST00000558544 EIF5A2Q9GZV4 153 aaKnown RBP12.55□□□□□ -0.4
TPM1-214ENST00000558544 KLF12Q9Y4X4 402 aa12.55□□□□□ -0.4
TPM1-214ENST00000558544 CSMD3Q7Z407 3707 aa12.54□□□□□ -0.4
TPM1-214ENST00000558544 TAGLN2P37802 199 aaKnown RBP12.54□□□□□ -0.4
TPM1-214ENST00000558544 SAPCD1Q5SSQ6 148 aa12.54□□□□□ -0.4
TPM1-214ENST00000558544 C11orf52Q96A22 123 aa12.54□□□□□ -0.4
TPM1-214ENST00000558544 PDE6DO43924 150 aa12.53□□□□□ -0.4
TPM1-214ENST00000558544 GCGP01275 180 aa12.53□□□□□ -0.4
TPM1-214ENST00000558544 ZNF80P51504 273 aaPredicted RBP12.53□□□□□ -0.4
TPM1-214ENST00000558544 PEA15Q15121 130 aa12.53□□□□□ -0.4
TPM1-214ENST00000558544 SMUG1Q53HV7 270 aa12.53□□□□□ -0.4
TPM1-214ENST00000558544 IL17DQ8TAD2 202 aa12.53□□□□□ -0.4
TPM1-214ENST00000558544 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
TPM1-214ENST00000558544 CELA1Q9UNI1 258 aa12.53□□□□□ -0.4
TPM1-214ENST00000558544 STARD9Q9P2P6 4700 aa12.52□□□□□ -0.41
TPM1-214ENST00000558544 TRBV6-1A0A0K0K1D8 114 aa12.52□□□□□ -0.41
TPM1-214ENST00000558544 TMEM218A2RU14 115 aa12.52□□□□□ -0.41
TPM1-214ENST00000558544 TMEM189A5PLL7 270 aa12.52□□□□□ -0.41
TPM1-214ENST00000558544 MUC21Q5SSG8 566 aa12.52□□□□□ -0.41
TPM1-214ENST00000558544 TMEM263Q8WUH6 116 aaKnown RBP12.52□□□□□ -0.41
TPM1-214ENST00000558544 C16orf74Q96GX8 76 aa12.52□□□□□ -0.41
TPM1-214ENST00000558544 IGHV1OR15-1A0A075B7D0 117 aa12.51□□□□□ -0.41
TPM1-214ENST00000558544 TRAV21A0A0B4J279 112 aa12.51□□□□□ -0.41
TPM1-214ENST00000558544 LTAP01374 205 aa12.51□□□□□ -0.41
TPM1-214ENST00000558544 S100A9P06702 114 aaKnown RBP12.51□□□□□ -0.41
TPM1-214ENST00000558544 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
TPM1-214ENST00000558544 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
TPM1-214ENST00000558544 RPL35P42766 123 aaKnown RBP12.51□□□□□ -0.41
TPM1-214ENST00000558544 NHLRC2Q8NBF2 726 aa12.51□□□□□ -0.41
TPM1-214ENST00000558544 RNASE8Q8TDE3 154 aaKnown RBP12.51□□□□□ -0.41
TPM1-214ENST00000558544 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
TPM1-214ENST00000558544 ZFP30Q9Y2G7 519 aa12.51□□□□□ -0.41
TPM1-214ENST00000558544 PLAC8L1A1L4L8 177 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 CBY3A6NI87 242 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 KRBOX1C9JBD0 128 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 SFTA3P0C7M3 94 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 C11orf45Q8TAV5 145 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 ZC2HC1AQ96GY0 325 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 LINC00467Q9BRT7 94 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 TP53TG3Q9ULZ0 132 aa12.5□□□□□ -0.41
TPM1-214ENST00000558544 PFN1P07737 140 aaKnown RBP12.49□□□□□ -0.41
TPM1-214ENST00000558544 NANOS2P60321 138 aaKnown RBP12.49□□□□□ -0.41
TPM1-214ENST00000558544 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
TPM1-214ENST00000558544 ZNF493Q6ZR52 646 aa12.49□□□□□ -0.41
TPM1-214ENST00000558544 SMDT1Q9H4I9 107 aa12.49□□□□□ -0.41
TPM1-214ENST00000558544 CXorf65A6NEN9 183 aa12.48□□□□□ -0.41
TPM1-214ENST00000558544 ANXA2RQ3ZCQ2 193 aa12.48□□□□□ -0.41
TPM1-214ENST00000558544 C10orf91Q5T1B1 145 aa12.48□□□□□ -0.41
TPM1-214ENST00000558544 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
TPM1-214ENST00000558544 BAGE2Q86Y30 109 aa12.48□□□□□ -0.41
TPM1-214ENST00000558544 TMEM183AQ8IXX5 376 aa12.48□□□□□ -0.41
TPM1-214ENST00000558544 MUC7Q8TAX7 377 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 159.6 ms