RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 A0A1W2PRE2 83 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 UMAD1C9J7I0 102 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 SMLR1H3BR10 107 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 J3KRW8 73 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 HMGB3O15347 200 aaKnown RBP6.03□□□□□ -1.44
TPM1-213ENST00000558400 PRM2P04554 102 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 SEC11BP0C7V7 166 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 DEFB130BP0DP73 79 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 DEFB130AP0DP74 79 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 NKX2-5P52952 324 aaPredicted RBP6.03□□□□□ -1.44
TPM1-213ENST00000558400 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
TPM1-213ENST00000558400 DAZ2Q13117 558 aaKnown RBP6.03□□□□□ -1.44
TPM1-213ENST00000558400 ANXA2RQ3ZCQ2 193 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 ZNF767PQ75MW2 155 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 EIF4E3Q8N5X7 224 aaKnown RBP6.03□□□□□ -1.44
TPM1-213ENST00000558400 ZFAND2AQ8N6M9 145 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 C5orf17Q8NAS9 161 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 ZNF680Q8NEM1 530 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 STOML3Q8TAV4 291 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 SH3BGRL3Q9H299 93 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 CYTL1Q9NRR1 136 aa6.03□□□□□ -1.44
TPM1-213ENST00000558400 ALMS1Q8TCU4 4167 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 PLAC8L1A1L4L8 177 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 RGS13O14921 159 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 ATP5G1P05496 136 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 P0DMU3 169 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 FAM231AP0DMU4 169 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 FAM231CP0DMU5 169 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 ATP5G3P48201 142 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 NDFIP1Q9BT67 221 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 NOP10Q9NPE3 64 aaKnown RBP6.02□□□□□ -1.45
TPM1-213ENST00000558400 EPDR1Q9UM22 224 aa6.02□□□□□ -1.45
TPM1-213ENST00000558400 IGHV1OR15-1A0A075B7D0 117 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 EIF3GO75821 320 aaKnown RBP eCLIP6.01□□□□□ -1.45
TPM1-213ENST00000558400 HTN3P15516 51 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 BTN1A1Q13410 526 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 IBA57Q5T440 356 aaKnown RBP6.01□□□□□ -1.45
TPM1-213ENST00000558400 Q6AWC8 147 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 EIF5AL1Q6IS14 154 aaKnown RBP6.01□□□□□ -1.45
TPM1-213ENST00000558400 FAM159AQ6UWV7 190 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 DPPA3Q6W0C5 159 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 GOLT1AQ6ZVE7 132 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 IQCF2Q8IXL9 164 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 C15orf53Q8NAA6 179 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 OR11H4Q8NGC9 324 aa6.01□□□□□ -1.45
TPM1-213ENST00000558400 ZNF471Q9BX82 626 aaPredicted RBP6.01□□□□□ -1.45
TPM1-213ENST00000558400 TRAV21A0A0B4J279 112 aa6□□□□□ -1.45
TPM1-213ENST00000558400 F5H768 121 aa6□□□□□ -1.45
TPM1-213ENST00000558400 F6UZH7 168 aa6□□□□□ -1.45
TPM1-213ENST00000558400 BCL2L11O43521 198 aa6□□□□□ -1.45
TPM1-213ENST00000558400 TCRAP04437 139 aa6□□□□□ -1.45
TPM1-213ENST00000558400 PPT1P50897 306 aa6□□□□□ -1.45
TPM1-213ENST00000558400 LGALS9BQ3B8N2 356 aa6□□□□□ -1.45
TPM1-213ENST00000558400 LGALSLQ3ZCW2 172 aaPredicted RBP6□□□□□ -1.45
TPM1-213ENST00000558400 ZFP69Q49AA0 526 aa6□□□□□ -1.45
TPM1-213ENST00000558400 SAPCD1Q5SSQ6 148 aa6□□□□□ -1.45
TPM1-213ENST00000558400 TMUB2Q71RG4 321 aa6□□□□□ -1.45
TPM1-213ENST00000558400 TCTE3Q8IZS6 198 aa6□□□□□ -1.45
TPM1-213ENST00000558400 LINC00612Q8N6U2 182 aa6□□□□□ -1.45
TPM1-213ENST00000558400 C18orf15Q96N68 181 aa6□□□□□ -1.45
TPM1-213ENST00000558400 TCEAL7Q9BRU2 100 aa6□□□□□ -1.45
TPM1-213ENST00000558400 TREM1Q9NP99 234 aa6□□□□□ -1.45
TPM1-213ENST00000558400 RPH3ALQ9UNE2 315 aa6□□□□□ -1.45
TPM1-213ENST00000558400 TRGV11A0A075B6L2 103 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 MAP1LC3B2A6NCE7 125 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 IFNA7P01567 189 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 TPT1P13693 172 aaKnown RBP5.99□□□□□ -1.45
TPM1-213ENST00000558400 FHITP49789 147 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 RAB5CP51148 216 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 TCL1AP56279 114 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 FLI1Q01543 452 aaPredicted RBP5.99□□□□□ -1.45
TPM1-213ENST00000558400 ZNF726P1Q15940 193 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 TDRG1Q3Y452 100 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 RNF212Q495C1 297 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 POM121L12Q8N7R1 296 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 CYB561D1Q8N8Q1 229 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 Q8TAT8 98 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 MBD3L1Q8WWY6 194 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 HIST1H2BAQ96A08 127 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 KCNS1Q96KK3 526 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 ATG101Q9BSB4 218 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 SPXQ9BT56 116 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 MAP1LC3BQ9GZQ8 125 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 GSN-AS1Q9NRJ2 163 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 TP53TG3Q9ULZ0 132 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 PSG8Q9UQ74 426 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 ARL2-SNX15V9GYD0 113 aa5.99□□□□□ -1.45
TPM1-213ENST00000558400 PLECQ15149 4684 aaKnown RBP5.99□□□□□ -1.45
TPM1-213ENST00000558400 TRGV2A0A075B6R0 118 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 GAGE12BA1L429 117 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 TEX46H3BTG2 121 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 GAGE7O76087 117 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 C1QBP02746 253 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 GAGE12FP0CL80 117 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 GAGE12GP0CL81 117 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 GAGE12IP0CL82 117 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 FAM3BP58499 235 aaPredicted RBP5.98□□□□□ -1.45
TPM1-213ENST00000558400 GNG5P63218 68 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 ZNF415Q09FC8 603 aa5.98□□□□□ -1.45
TPM1-213ENST00000558400 SLAQ13239 276 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms