RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 DNAH11Q96DT5 4516 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 RBAKDNA6NC62 111 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 DIRC3C9JPN6 131 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 SPINK4O60575 86 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 PTTG1O95997 202 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 ZNF415Q09FC8 603 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 ESRGQ1W209 222 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 IBA57Q5T440 356 aaKnown RBP8.27□□□□□ -1.09
HERC1-202ENST00000558324 HSD17B11Q8NBQ5 300 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 CMTM2Q8TAZ6 248 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 MED28Q9H204 178 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 OTORQ9NRC9 128 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 NAGKQ9UJ70 344 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 PKD1P98161 4303 aa8.27□□□□□ -1.09
HERC1-202ENST00000558324 PGPA6NDG6 321 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 TNP2Q05952 138 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 ZNF266Q14584 549 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 C6orf223Q8N319 242 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 OR10G4Q8NGN3 311 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 OR10G9Q8NGN4 311 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 OR10G7Q8NGN6 311 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 Q9H8V8 135 aa8.26□□□□□ -1.09
HERC1-202ENST00000558324 TRBV7-9A0A0J9YWB2 115 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 H3BNG1 76 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 ARL14EPLP0DKL9 152 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 GNG5P63218 68 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 TMEM183BQ1AE95 376 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 FAM74A1Q5RGS3 127 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 PQLC2Q6ZP29 291 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 GOLT1AQ6ZVE7 132 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 TMEM183AQ8IXX5 376 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 ST6GAL2Q96JF0 529 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 C18orf15Q96N68 181 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 KRTAP1-5Q9BYS1 174 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 MDFICQ9P1T7 246 aa8.25□□□□□ -1.09
HERC1-202ENST00000558324 A0A096LPF7 62 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 TRAV8-1A0A0A6YYK1 113 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 F6UZH7 168 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 PAX4O43316 350 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 CDC34P49427 236 aaPredicted RBP8.24□□□□□ -1.09
HERC1-202ENST00000558324 Q5BKY6 102 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 FAM159AQ6UWV7 190 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 SGK494Q96LW2 274 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 C8orf49Q96NF6 230 aa8.24□□□□□ -1.09
HERC1-202ENST00000558324 MRPS16Q9Y3D3 137 aaKnown RBP8.24□□□□□ -1.09
HERC1-202ENST00000558324 MED14OSP0DP75 135 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 ATP6V0CP27449 155 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 TTC32Q5I0X7 151 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 Q6AWC8 147 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 AQP10Q96PS8 301 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 UPK3BQ9BT76 320 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 KRTAP17-1Q9BYP8 105 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 SH3BGRL3Q9H299 93 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 LENEPQ9Y5L5 61 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 ICOSQ9Y6W8 199 aa8.23□□□□□ -1.09
HERC1-202ENST00000558324 TRGV11A0A075B6L2 103 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 FXYD6-FXYD2A0A087WZ82 144 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 SFTA3P0C7M3 94 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 IQCF2Q8IXL9 164 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 OR2G3Q8NGZ4 309 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 TMED6Q8WW62 240 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 RAB24Q969Q5 203 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 TVP23CQ96ET8 276 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 TREM1Q9NP99 234 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 PRO0255Q9UI72 69 aa8.22□□□□□ -1.09
HERC1-202ENST00000558324 TRGV4A0A0C4DH28 118 aa8.21□□□□□ -1.1
HERC1-202ENST00000558324 GIPP09681 153 aaPredicted RBP8.21□□□□□ -1.1
HERC1-202ENST00000558324 STAG3L2P0CL84 134 aa8.21□□□□□ -1.1
HERC1-202ENST00000558324 STAG3L3P0CL85 134 aa8.21□□□□□ -1.1
HERC1-202ENST00000558324 GCHFRP30047 84 aa8.21□□□□□ -1.1
HERC1-202ENST00000558324 CRYBA4P53673 196 aa8.21□□□□□ -1.1
HERC1-202ENST00000558324 FHL2Q14192 279 aa8.21□□□□□ -1.1
HERC1-202ENST00000558324 PSMG3Q9BT73 122 aaPredicted RBP8.21□□□□□ -1.1
HERC1-202ENST00000558324 HHLA3Q9XRX5 114 aa8.21□□□□□ -1.1
HERC1-202ENST00000558324 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
HERC1-202ENST00000558324 C16orf90A8MZG2 172 aa8.2□□□□□ -1.1
HERC1-202ENST00000558324 GNRH2O43555 120 aa8.2□□□□□ -1.1
HERC1-202ENST00000558324 NXPH4O95158 308 aa8.2□□□□□ -1.1
HERC1-202ENST00000558324 RPL7L1Q6DKI1 246 aaKnown RBP8.2□□□□□ -1.1
HERC1-202ENST00000558324 INO80EQ8NBZ0 244 aaPredicted RBP8.2□□□□□ -1.1
HERC1-202ENST00000558324 ZNF479Q96JC4 524 aa8.2□□□□□ -1.1
HERC1-202ENST00000558324 NDFIP1Q9BT67 221 aa8.2□□□□□ -1.1
HERC1-202ENST00000558324 IGHV3-16A0A0C4DH30 117 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 RNF222A6NCQ9 220 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 GGTLC3B5MD39 225 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 MBP02144 154 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 TCRAP04437 139 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 TYMSP04818 313 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 SLAQ13239 276 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 C5orf17Q8NAS9 161 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 OR2T35Q8NGX2 323 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 SPXQ9BT56 116 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 ACTR3CQ9C0K3 210 aaPredicted RBP8.19□□□□□ -1.1
HERC1-202ENST00000558324 SDF2L1Q9HCN8 221 aa8.19□□□□□ -1.1
HERC1-202ENST00000558324 BORCS7-ASMTA0A0B4J1R7 106 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 K7EQM0 130 aa8.18□□□□□ -1.1
HERC1-202ENST00000558324 SIVA1O15304 175 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms