RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 SPANXN5Q5MJ07 72 aa6.48□□□□□ -1.37
USP3-208ENST00000558285 Q6ZN92 141 aa6.48□□□□□ -1.37
USP3-208ENST00000558285 C16orf92Q96LL3 132 aa6.48□□□□□ -1.37
USP3-208ENST00000558285 PSENENQ9NZ42 101 aa6.48□□□□□ -1.37
USP3-208ENST00000558285 IGSF23A1L1A6 192 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 HYPMO75409 117 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 IGKV1-17P01599 117 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 PSMB3P49720 205 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 KRTAP19-1Q8IUB9 90 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 STXBP6Q8NFX7 210 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 OR10P1Q8NGE3 313 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 OR5C1Q8NGR4 320 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 MUC7Q8TAX7 377 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 RNF125Q96EQ8 232 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 GPR82Q96P67 336 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 TRGV9Q99603 122 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 TIMM9Q9Y5J7 89 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 IGKV3-7A0A075B6H7 116 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 IGHV3-49A0A0A0MS15 119 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 A0A1B0GV72 72 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 DIRC3C9JPN6 131 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 FNDC10F2Z333 226 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 C17orf112F2Z3M2 114 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 TSPOP30536 169 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 NIT1Q86X76 327 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 STHQ8IWL8 128 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 ZNF709Q8N972 641 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 SCGB1C1Q8TD33 95 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 TMEM147Q9BVK8 224 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 MS4A6AQ9H2W1 248 aa6.47□□□□□ -1.37
USP3-208ENST00000558285 SSSCA1O60232 199 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 ZNF253O75346 499 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 PSG1P11464 419 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 LYZP61626 148 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 VAMP3Q15836 100 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 CST9LP1Q5W188 147 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 MORN3Q6PF18 240 aaPredicted RBP6.46□□□□□ -1.38
USP3-208ENST00000558285 SIGLEC15Q6ZMC9 328 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 LINC00322Q6ZN03 302 aaPredicted RBP6.46□□□□□ -1.38
USP3-208ENST00000558285 WFDC3Q8IUB2 231 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 GATAD1Q8WUU5 269 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 TXNDC17Q9BRA2 123 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 NRN1Q9NPD7 142 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 TGP01266 2768 aa6.46□□□□□ -1.38
USP3-208ENST00000558285 IGHV3OR16-13A0A075B7E8 117 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 IGHV3-74A0A0B4J1X5 117 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 RBMY1BA6NDE4 496 aaKnown RBP6.45□□□□□ -1.38
USP3-208ENST00000558285 RBMY1EA6NEQ0 496 aaKnown RBP6.45□□□□□ -1.38
USP3-208ENST00000558285 FAM24AA6NFZ4 105 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 SPRY2O43597 315 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 MT-ND6P03923 174 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 RBMY1DP0C7P1 496 aaKnown RBP6.45□□□□□ -1.38
USP3-208ENST00000558285 CRISP2P16562 243 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 EDN2P20800 178 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 HBG1P69891 147 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 HBG2P69892 147 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 OR10J3Q5JRS4 329 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 OR8I2Q8N0Y5 310 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 TMEM256Q8N2U0 113 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 C1QTNF4Q9BXJ3 329 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 SAMD10Q9BYL1 202 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 IGHV3-66A0A0C4DH42 116 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 SMIM17P0DL12 118 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 MLANAQ16655 118 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 ODF3L2Q3SX64 289 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 SPATA31B1PQ5VZV4 182 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 THAP8Q8NA92 274 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 ZNF414Q96IQ9 312 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 PARLQ9H300 379 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 MAP6D1Q9H9H5 199 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 NPVFQ9HCQ7 196 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 RPRMQ9NS64 109 aa6.45□□□□□ -1.38
USP3-208ENST00000558285 CMYA5Q8N3K9 4069 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 BUB3O43684 328 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 PDE6DO43924 150 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 GPX1P07203 203 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 DEFB131AP59861 70 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 RHOBP62745 196 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 TEPPQ6URK8 271 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 MTURNQ8N3F0 131 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 Q8N976 141 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 OR1B1Q8NGR6 318 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 AP5S1Q9NUS5 200 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 MRPL36Q9P0J6 103 aaKnown RBP6.44□□□□□ -1.38
USP3-208ENST00000558285 U3KQE9 123 aa6.44□□□□□ -1.38
USP3-208ENST00000558285 H3BP45 60 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 K7EQG2 157 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 RPL35AP18077 110 aaKnown RBP6.43□□□□□ -1.38
USP3-208ENST00000558285 RPL7P18124 248 aaKnown RBP6.43□□□□□ -1.38
USP3-208ENST00000558285 TDRG1Q3Y452 100 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 WDR73Q6P4I2 378 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 BAGE3Q86Y29 109 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 BAGE2Q86Y30 109 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 GLMPQ8WWB7 406 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 WFDC10AQ9H1F0 79 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 KCNIP2Q9NS61 270 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 SELENOKQ9Y6D0 94 aa6.43□□□□□ -1.38
USP3-208ENST00000558285 CTXND1A0A1B0GTU2 59 aa6.42□□□□□ -1.38
USP3-208ENST00000558285 SERF1AO75920 110 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms