RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 MT-ND4LP03901 98 aa12.44□□□□□ -0.42
SNX1-203ENST00000558040 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
SNX1-203ENST00000558040 C15orf54Q8N8G6 183 aa12.44□□□□□ -0.42
SNX1-203ENST00000558040 SFRP2Q96HF1 295 aa12.44□□□□□ -0.42
SNX1-203ENST00000558040 SRD5A3Q9H8P0 318 aa12.44□□□□□ -0.42
SNX1-203ENST00000558040 J3KRW8 73 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 PPP1R2P9O14990 202 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 PFN1P07737 140 aaKnown RBP12.43□□□□□ -0.42
SNX1-203ENST00000558040 KRTAP10-11P60412 298 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 SPINK13Q1W4C9 94 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 IBA57Q5T440 356 aaKnown RBP12.43□□□□□ -0.42
SNX1-203ENST00000558040 FAM231DQ6ZW35 169 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 Q8N1Y9 231 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 OSTCQ9NRP0 149 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 SORL1Q92673 2214 aa12.43□□□□□ -0.42
SNX1-203ENST00000558040 TRAV21A0A0B4J279 112 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 C7orf77A4D0Y5 90 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
SNX1-203ENST00000558040 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
SNX1-203ENST00000558040 FABP5P3A8MUU1 101 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 M0R2Z0 102 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 P01737 135 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
SNX1-203ENST00000558040 RNASE4P34096 147 aaKnown RBP12.42□□□□□ -0.42
SNX1-203ENST00000558040 MORN3Q6PF18 240 aaPredicted RBP12.42□□□□□ -0.42
SNX1-203ENST00000558040 OR10G8Q8NGN5 311 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
SNX1-203ENST00000558040 A0A087WWC5 75 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 C7orf71A4D174 169 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 C19orf71A6NCJ1 209 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 SH2D1AO60880 128 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 ZNF80P51504 273 aaPredicted RBP12.41□□□□□ -0.42
SNX1-203ENST00000558040 RNF212Q495C1 297 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 PRR9Q5T870 116 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 Q6AWC8 147 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 CTDSP1Q9GZU7 261 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 RNASE7Q9H1E1 156 aaKnown RBP12.41□□□□□ -0.42
SNX1-203ENST00000558040 TUBA4BQ9H853 241 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 RPS10P5Q9NQ39 176 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 VWFP04275 2813 aa12.41□□□□□ -0.42
SNX1-203ENST00000558040 GATCO43716 136 aaKnown RBP12.4□□□□□ -0.42
SNX1-203ENST00000558040 RPL35AP18077 110 aaKnown RBP12.4□□□□□ -0.42
SNX1-203ENST00000558040 CRIP1P50238 77 aa12.4□□□□□ -0.42
SNX1-203ENST00000558040 FXYD7P58549 80 aa12.4□□□□□ -0.42
SNX1-203ENST00000558040 BTN1A1Q13410 526 aa12.4□□□□□ -0.42
SNX1-203ENST00000558040 GFI1BQ5VTD9 330 aa12.4□□□□□ -0.42
SNX1-203ENST00000558040 LINC00322Q6ZN03 302 aaPredicted RBP12.4□□□□□ -0.42
SNX1-203ENST00000558040 NUDT10Q8NFP7 164 aa12.4□□□□□ -0.42
SNX1-203ENST00000558040 NUDT11Q96G61 164 aa12.4□□□□□ -0.42
SNX1-203ENST00000558040 C1QTNF4Q9BXJ3 329 aa12.4□□□□□ -0.42
SNX1-203ENST00000558040 TRAV12-2A0A075B6T6 113 aa12.39□□□□□ -0.43
SNX1-203ENST00000558040 ZNF705GA8MUZ8 300 aaPredicted RBP12.39□□□□□ -0.43
SNX1-203ENST00000558040 H7BYZ3 331 aa12.39□□□□□ -0.43
SNX1-203ENST00000558040 INSP01308 110 aa12.39□□□□□ -0.43
SNX1-203ENST00000558040 RPP21Q9H633 154 aaKnown RBP12.39□□□□□ -0.43
SNX1-203ENST00000558040 ANK2Q01484 3957 aa12.39□□□□□ -0.43
SNX1-203ENST00000558040 AGRNO00468 2067 aa12.39□□□□□ -0.43
SNX1-203ENST00000558040 LOC102724200A0A096LPH7 203 aaPredicted RBP12.38□□□□□ -0.43
SNX1-203ENST00000558040 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
SNX1-203ENST00000558040 C20orf144Q9BQM9 153 aa12.38□□□□□ -0.43
SNX1-203ENST00000558040 TMEM242Q9NWH2 141 aa12.38□□□□□ -0.43
SNX1-203ENST00000558040 TRRAPQ9Y4A5 3859 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 TRAV12-3A0A0B4J271 114 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 XKRY2A2RUG3 117 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 TMEM189A5PLL7 270 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 CRXO43186 299 aaPredicted RBP12.37□□□□□ -0.43
SNX1-203ENST00000558040 ORM1P02763 201 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 RPS20P60866 119 aaKnown RBP12.37□□□□□ -0.43
SNX1-203ENST00000558040 CT83Q5H943 113 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 KPRPQ5T749 579 aaPredicted RBP12.37□□□□□ -0.43
SNX1-203ENST00000558040 ATRAIDQ6UW56 229 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 OR2D3Q8NGH3 330 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 V9GYV3 84 aa12.37□□□□□ -0.43
SNX1-203ENST00000558040 KIR2DL5BA0A0G2JN68 375 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 KIR2DL5BA0A0G2JPC4 375 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 IGHV4-30-4P0DP06 118 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 APOC4P55056 127 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 LINC01559Q495D7 138 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 KIR2DL5AQ8N109 375 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 KIR2DL5BQ8NHK3 375 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 CSTL1Q9H114 145 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 XCL2Q9UBD3 114 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 NAGKQ9UJ70 344 aa12.36□□□□□ -0.43
SNX1-203ENST00000558040 A8MWL6 223 aa12.35□□□□□ -0.43
SNX1-203ENST00000558040 ZNF324O75467 553 aaPredicted RBP12.35□□□□□ -0.43
SNX1-203ENST00000558040 CA1P00915 261 aaPredicted RBP12.35□□□□□ -0.43
SNX1-203ENST00000558040 FAM159AQ6UWV7 190 aa12.35□□□□□ -0.43
SNX1-203ENST00000558040 TMEM256Q8N2U0 113 aa12.35□□□□□ -0.43
SNX1-203ENST00000558040 A8MZ25 164 aa12.34□□□□□ -0.43
SNX1-203ENST00000558040 KCNS1Q96KK3 526 aa12.34□□□□□ -0.43
SNX1-203ENST00000558040 GOLT1BQ9Y3E0 138 aa12.34□□□□□ -0.43
SNX1-203ENST00000558040 CXorf65A6NEN9 183 aa12.33□□□□□ -0.44
SNX1-203ENST00000558040 S100PP25815 95 aa12.33□□□□□ -0.44
SNX1-203ENST00000558040 RPL19P84098 196 aaKnown RBP12.33□□□□□ -0.44
SNX1-203ENST00000558040 TSKUQ8WUA8 353 aa12.33□□□□□ -0.44
SNX1-203ENST00000558040 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
SNX1-203ENST00000558040 PYGO2Q9BRQ0 406 aa12.33□□□□□ -0.44
SNX1-203ENST00000558040 TMEM208Q9BTX3 173 aa12.33□□□□□ -0.44
SNX1-203ENST00000558040 SMCO4Q9NRQ5 59 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 291.3 ms