RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 A8MWL6 223 aa15.22■□□□□ 0.03
SNRPA1-205ENST00000558036 PF4P02776 101 aa15.22■□□□□ 0.03
SNRPA1-205ENST00000558036 ZNF124Q15973 351 aa15.22■□□□□ 0.03
SNRPA1-205ENST00000558036 MRPL54Q6P161 138 aaKnown RBP15.22■□□□□ 0.03
SNRPA1-205ENST00000558036 CT83Q5H943 113 aa15.22■□□□□ 0.03
SNRPA1-205ENST00000558036 SRD5A3Q9H8P0 318 aa15.22■□□□□ 0.03
SNRPA1-205ENST00000558036 PPP1R14DQ9NXH3 145 aa15.22■□□□□ 0.03
SNRPA1-205ENST00000558036 C1orf196B1AJZ1 125 aa15.21■□□□□ 0.03
SNRPA1-205ENST00000558036 TYMSP04818 313 aa15.21■□□□□ 0.03
SNRPA1-205ENST00000558036 DEFB131AP59861 70 aa15.21■□□□□ 0.03
SNRPA1-205ENST00000558036 ZFAND2AQ8N6M9 145 aa15.21■□□□□ 0.03
SNRPA1-205ENST00000558036 OR4B1Q8NGF8 309 aa15.21■□□□□ 0.03
SNRPA1-205ENST00000558036 NAT8BQ9UHF3 227 aa15.21■□□□□ 0.03
SNRPA1-205ENST00000558036 TRRAPQ9Y4A5 3859 aa15.21■□□□□ 0.02
SNRPA1-205ENST00000558036 A0A0J9YX75 114 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 PGLYRP4Q96LB8 373 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 SIGLEC8Q9NYZ4 499 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 TMEM189A5PLL7 270 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 FABP5P3A8MUU1 101 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 ORM1P02763 201 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 KRTAP24-1Q3LI83 254 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 C11orf21Q9P2W6 132 aa15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 ZNF256Q9Y2P7 627 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-205ENST00000558036 KNCNA6PVL3 124 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 SPATA3Q8NHX4 192 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 FAM19A4Q96LR4 140 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 CITED1Q99966 193 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 TPPP3Q9BW30 176 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 TRAV9-1A0A075B6T8 112 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 EBLN2Q6P2I7 272 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 LENEPQ9Y5L5 61 aa15.19■□□□□ 0.02
SNRPA1-205ENST00000558036 RAB5BP61020 215 aa15.18■□□□□ 0.02
SNRPA1-205ENST00000558036 PRR31Q5SQ13 230 aa15.18■□□□□ 0.02
SNRPA1-205ENST00000558036 ZNF575Q86XF7 245 aa15.18■□□□□ 0.02
SNRPA1-205ENST00000558036 LINC00482Q8N8I6 264 aa15.18■□□□□ 0.02
SNRPA1-205ENST00000558036 SPAG8Q99932 426 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-205ENST00000558036 GPX1P07203 203 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 RNASE4P34096 147 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 ACTL10Q5JWF8 245 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 APRG1Q8IVJ8 170 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 SAV1Q9H4B6 383 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 MAP6D1Q9H9H5 199 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 OR4C46A6NHA9 309 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 FABP9Q0Z7S8 132 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 PRIMA1Q86XR5 153 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 FRZBQ92765 325 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 GFRA4Q9GZZ7 299 aa15.17■□□□□ 0.02
SNRPA1-205ENST00000558036 TRAV2A0A0B4J234 112 aa15.16■□□□□ 0.02
SNRPA1-205ENST00000558036 GRIFINA4D1Z8 144 aa15.16■□□□□ 0.02
SNRPA1-205ENST00000558036 PHOX2AO14813 284 aa15.16■□□□□ 0.02
SNRPA1-205ENST00000558036 FOXI2Q6ZQN5 318 aa15.16■□□□□ 0.02
SNRPA1-205ENST00000558036 IGKV3D-20A0A0C4DH25 116 aa15.16■□□□□ 0.02
SNRPA1-205ENST00000558036 SSTP61278 116 aa15.16■□□□□ 0.02
SNRPA1-205ENST00000558036 AGRNO00468 2067 aa15.15■□□□□ 0.02
SNRPA1-205ENST00000558036 TRAV25A0A0B4J276 109 aa15.15■□□□□ 0.02
SNRPA1-205ENST00000558036 M0R2Z0 102 aa15.15■□□□□ 0.02
SNRPA1-205ENST00000558036 TRAPPC1Q9Y5R8 145 aa15.15■□□□□ 0.02
SNRPA1-205ENST00000558036 MUC21A0A0G2JKD1 596 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 MUC21A0A140T8X8 626 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 IGLV1-51P01701 117 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 CAMPP49913 170 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 RAB4BP61018 213 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 MUC21Q5SSG8 566 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 NAGKQ9UJ70 344 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 SNURFLB1AK76 121 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 CRISP2P16562 243 aa15.14■□□□□ 0.01
SNRPA1-205ENST00000558036 TRAV12-2A0A075B6T6 113 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 FAM231BA6NCW3 169 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 ODF3L2Q3SX64 289 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 LINC01559Q495D7 138 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BKO60814 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BJP06899 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 ARMS2P0C7Q2 107 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 TRGC1P0CF51 173 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BOP23527 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BBP33778 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 FOXA3P55318 350 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BDP58876 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BCP62807 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST2H2BEQ16778 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 SPINK13Q1W4C9 94 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BHQ93079 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BNQ99877 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 HIST1H2BMQ99879 126 aa15.13■□□□□ 0.01
SNRPA1-205ENST00000558036 XKRY2A2RUG3 117 aa15.12■□□□□ 0.01
SNRPA1-205ENST00000558036 KLLNB2CW77 178 aa15.12■□□□□ 0.01
SNRPA1-205ENST00000558036 TMEM136Q6ZRR5 245 aa15.12■□□□□ 0.01
SNRPA1-205ENST00000558036 FXYD7P58549 80 aa15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 LYZL1Q6UWQ5 148 aa15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 TRBV7-9A0A0J9YWB2 115 aa15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 H3BMM0 161 aa15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 DUSP14O95147 198 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 HLA-DRB4P13762 266 aa15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 AMTNQ6UX39 209 aa15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 MRPL18Q9H0U6 180 aaKnown RBP15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 HLA-DRB4X5D2U9 266 aa15.11■□□□□ 0.01
SNRPA1-205ENST00000558036 TRAV12-3A0A0B4J271 114 aa15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 TRAV21A0A0B4J279 112 aa15.1■□□□□ 0.01
SNRPA1-205ENST00000558036 A0A1B0GXF2 115 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms