RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 MED6O75586 246 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 IFNA5P01569 189 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 TSPOP30536 169 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 CCR6P51684 374 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 SSBP1Q04837 148 aaKnown RBP3.23□□□□□ -1.89
HIF1A-209ENST00000556827 FGL1Q08830 312 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 OR5I1Q13606 314 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 OR2F1Q13607 317 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 SMCO1Q147U7 214 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 NMSQ5H8A3 153 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 GDF5OSQ5U4N7 250 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF493Q6ZR52 646 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 SSX7Q7RTT5 188 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 TMEM144Q7Z5S9 345 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 SPATA12Q7Z6I5 190 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 C1orf158Q8N1D5 194 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF709Q8N972 641 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 TMEM229BQ8NBD8 167 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 BPIFCQ8NFQ6 507 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 OR1S1Q8NH92 325 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 ZNRF2Q8NHG8 242 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 GLYATL2Q8WU03 294 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 IL22RA2Q969J5 263 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 GPR146Q96CH1 333 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 GNPNAT1Q96EK6 184 aaPredicted RBP3.23□□□□□ -1.89
HIF1A-209ENST00000556827 PRRT1Q99946 306 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 RSG1Q9BU20 258 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 TMEM147Q9BVK8 224 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 SLC25A22Q9H936 323 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 MTFP1Q9UDX5 166 aa3.23□□□□□ -1.89
HIF1A-209ENST00000556827 LYSTQ99698 3801 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 A0A0G2JRQ6 117 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 A0A1B0GWB2 263 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 F6UB75 175 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 M0R2Z0 102 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 RGS5O15539 181 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 RPL7P18124 248 aaKnown RBP3.22□□□□□ -1.89
HIF1A-209ENST00000556827 ORM2P19652 201 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 TGFBR1P36897 503 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 TAS2R60P59551 318 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 DEFB1P60022 68 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 MRPS10P82664 201 aaKnown RBP3.22□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF90Q03938 601 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 AKR1C1Q04828 323 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 SPINK13Q1W4C9 94 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 LHFPL1Q86WI0 220 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 SELENOHQ8IZQ5 122 aaKnown RBP3.22□□□□□ -1.89
HIF1A-209ENST00000556827 ZNF738Q8NE65 137 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 OR4D5Q8NGN0 318 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 CIB3Q96Q77 187 aaPredicted RBP3.22□□□□□ -1.89
HIF1A-209ENST00000556827 TRGV9Q99603 122 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 RBKSQ9H477 322 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 EXTL2Q9UBQ6 330 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 SCP2D1Q9UJQ7 156 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 LINC00588Q9Y4M8 146 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 TMEM56-RWDD3S4R434 201 aa3.22□□□□□ -1.89
HIF1A-209ENST00000556827 DNAH7Q8WXX0 4024 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 TRAV26-1A0A087WT03 109 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 A0A0B4J2A0 478 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 CRYM-AS1A6NIL9 109 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 ZNF98A6NK75 572 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 BOLA2-SMG1P6H3BVE0 249 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 H7BYZ3 331 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 ATP6V1G2O95670 118 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 RLN2P04090 185 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 OR5G3P0C626 314 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 AKAIN1P0CW23 69 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 INAFM2P0DMQ5 153 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 M6PRP20645 277 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 VBP1P61758 197 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 HIST1H1AQ02539 215 aaPredicted RBP3.21□□□□□ -1.9
HIF1A-209ENST00000556827 DAZ2Q13117 558 aaKnown RBP3.21□□□□□ -1.9
HIF1A-209ENST00000556827 CLVS1Q8IUQ0 354 aaPredicted RBP3.21□□□□□ -1.9
HIF1A-209ENST00000556827 C15orf54Q8N8G6 183 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 C20orf203Q8NBC4 194 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 OR11H7Q8NGC8 314 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 FRZBQ92765 325 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 YIPF6Q96EC8 236 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 TMEM101Q96IK0 257 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 RTBDNQ9BSG5 229 aaPredicted RBP3.21□□□□□ -1.9
HIF1A-209ENST00000556827 DAZ3Q9NR90 486 aaKnown RBP3.21□□□□□ -1.9
HIF1A-209ENST00000556827 MCUBQ9NWR8 336 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 RABL2AQ9UBK7 228 aaPredicted RBP3.21□□□□□ -1.9
HIF1A-209ENST00000556827 SHPKQ9UHJ6 478 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 RABL2BQ9UNT1 228 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 NACAE9PAV3 2078 aa3.21□□□□□ -1.9
HIF1A-209ENST00000556827 SACSQ9NZJ4 4579 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 TRGV2A0A075B6R0 118 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 TRAV12-2A0A075B6T6 113 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 A0A0J9YY99 117 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 SMCO3A2RU48 225 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 H3BNG1 76 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 WRBO00258 174 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 HYPMO75409 117 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 IL5P05113 134 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 FAUP35544 74 aaKnown RBP3.2□□□□□ -1.9
HIF1A-209ENST00000556827 CDKN1BP46527 198 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 NCS1P62166 190 aa3.2□□□□□ -1.9
HIF1A-209ENST00000556827 IL18Q14116 193 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms