RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 NUDT11Q96G61 164 aa10.72□□□□□ -0.69
TRAPPC6B-206ENST00000556765 RNASE7Q9H1E1 156 aaKnown RBP10.72□□□□□ -0.69
TRAPPC6B-206ENST00000556765 RPP21Q9H633 154 aaKnown RBP10.72□□□□□ -0.69
TRAPPC6B-206ENST00000556765 TSSC4Q9Y5U2 329 aaPredicted RBP10.72□□□□□ -0.69
TRAPPC6B-206ENST00000556765 HECTD4Q9Y4D8 3996 aa10.72□□□□□ -0.69
TRAPPC6B-206ENST00000556765 TRAV2A0A0B4J234 112 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 IGHV3-66A0A0C4DH42 116 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 SOCS3O14543 225 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 MT-ND6P03923 174 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 TMEM78Q5T7P6 136 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 Q6AWC8 147 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 WDR73Q6P4I2 378 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 C9orf47Q6ZRZ4 202 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 TCF24Q7RTU0 167 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 LINC00477Q96M19 166 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 PRR25Q96S07 402 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 NAT8BQ9UHF3 227 aa10.71□□□□□ -0.69
TRAPPC6B-206ENST00000556765 IGHV3OR16-13A0A075B7E8 117 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 IGHV3-49A0A0A0MS15 119 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 TRAV8-1A0A0A6YYK1 113 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 IGHV3-74A0A0B4J1X5 117 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 TRAV8-2A0A0B4J237 113 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 PAFAH1B2P68402 229 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 SMUG1Q53HV7 270 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 KHDC1LQ5JSQ8 128 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 PRR27Q6MZM9 219 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ATP5L2Q7Z4Y8 100 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 KLHL30-AS1Q8NEE0 82 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 OR1N2Q8NGR9 330 aa10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 MCRIP2Q9BUT9 160 aaKnown RBP10.7□□□□□ -0.7
TRAPPC6B-206ENST00000556765 IZUMO1RA6ND01 250 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 C2orf70A6NJV1 201 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 S100A6P06703 90 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ZNF138P52744 262 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 RPS20P60866 119 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 RPL11P62913 178 aaKnown RBP10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 FAM162BQ5T6X4 162 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 OR11H1Q8NG94 326 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 OR10J6PQ8NGY7 276 aa10.69□□□□□ -0.7
TRAPPC6B-206ENST00000556765 DNAH10Q8IVF4 4471 aa10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 IGKV2-40A0A087WW87 121 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 IGKV2D-40P01614 121 aaPredicted RBP10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 CBLN1P23435 193 aa10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 SNRPD3P62318 126 aaKnown RBP10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 FHL3Q13643 280 aa10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ZNF738Q8NE65 137 aa10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 SGK494Q96LW2 274 aa10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ABCA13Q86UQ4 5058 aa10.68□□□□□ -0.7
TRAPPC6B-206ENST00000556765 OR9G4Q8NGQ1 327 aa10.67□□□□□ -0.7
TRAPPC6B-206ENST00000556765 GNB1LQ9BYB4 327 aa10.67□□□□□ -0.7
TRAPPC6B-206ENST00000556765 SIGLEC8Q9NYZ4 499 aa10.67□□□□□ -0.7
TRAPPC6B-206ENST00000556765 A0A1B0GW15 77 aa10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 HLA-DQA1P01909 254 aa10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 S100A8P05109 93 aa10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 FOXA3P55318 350 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 HIST1H1AQ02539 215 aaPredicted RBP10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ACTL10Q5JWF8 245 aa10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 RBPMS2Q6ZRY4 209 aaKnown RBP10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 RNF182Q8N6D2 247 aa10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 DCANP1Q8TF63 244 aa10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 VGLL1Q99990 258 aa10.66□□□□□ -0.7
TRAPPC6B-206ENST00000556765 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
TRAPPC6B-206ENST00000556765 FABP5P3A8MUU1 101 aa10.65□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ZNF705FA8MVS1 300 aaPredicted RBP10.65□□□□□ -0.7
TRAPPC6B-206ENST00000556765 TRGC2P03986 189 aa10.65□□□□□ -0.7
TRAPPC6B-206ENST00000556765 HLA-DMBP28068 263 aa10.65□□□□□ -0.7
TRAPPC6B-206ENST00000556765 OR2D3Q8NGH3 330 aa10.65□□□□□ -0.7
TRAPPC6B-206ENST00000556765 ODF3Q96PU9 254 aa10.65□□□□□ -0.7
TRAPPC6B-206ENST00000556765 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 K7EQG2 157 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 SLURP1P55000 103 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 SBSPONQ8IVN8 264 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 OR8A1Q8NGG7 326 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 BORCS7Q96B45 105 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 NEU1Q99519 415 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 AGPAT4-IT1Q9H0P7 198 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 MS4A6AQ9H2W1 248 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 TRAPPC1Q9Y5R8 145 aa10.64□□□□□ -0.71
TRAPPC6B-206ENST00000556765 CCL24O00175 119 aa10.63□□□□□ -0.71
TRAPPC6B-206ENST00000556765 SH2D1AO60880 128 aa10.63□□□□□ -0.71
TRAPPC6B-206ENST00000556765 IGFL4Q6B9Z1 124 aa10.63□□□□□ -0.71
TRAPPC6B-206ENST00000556765 LINC00322Q6ZN03 302 aaPredicted RBP10.63□□□□□ -0.71
TRAPPC6B-206ENST00000556765 NUP35Q8NFH5 326 aa10.63□□□□□ -0.71
TRAPPC6B-206ENST00000556765 DYNLRB2Q8TF09 96 aa10.63□□□□□ -0.71
TRAPPC6B-206ENST00000556765 TMEM189A5PLL7 270 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 PRAC2D3DTV9 90 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 DUSP14O95147 198 aaKnown RBP10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 DEFB136Q30KP8 78 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 LINC01559Q495D7 138 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 APRG1Q8IVJ8 170 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 RAX2Q96IS3 184 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 C8orf49Q96NF6 230 aa10.62□□□□□ -0.71
TRAPPC6B-206ENST00000556765 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
TRAPPC6B-206ENST00000556765 PHOX2AO14813 284 aa10.61□□□□□ -0.71
TRAPPC6B-206ENST00000556765 HIST1H2BKO60814 126 aa10.61□□□□□ -0.71
TRAPPC6B-206ENST00000556765 HIST1H2BJP06899 126 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms