RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 RNASE8Q8TDE3 154 aaKnown RBP17.54■□□□□ 0.4
SDR39U1-221ENST00000556707 TRAV10A0A0B4J240 114 aa17.52■□□□□ 0.4
SDR39U1-221ENST00000556707 LYRM9A8MSI8 78 aa17.52■□□□□ 0.4
SDR39U1-221ENST00000556707 H2AFB1P0C5Y9 115 aa17.52■□□□□ 0.4
SDR39U1-221ENST00000556707 RAB5CP51148 216 aa17.52■□□□□ 0.4
SDR39U1-221ENST00000556707 CYB561D1Q8N8Q1 229 aa17.52■□□□□ 0.4
SDR39U1-221ENST00000556707 LINC00467Q9BRT7 94 aa17.52■□□□□ 0.4
SDR39U1-221ENST00000556707 ATG101Q9BSB4 218 aa17.52■□□□□ 0.4
SDR39U1-221ENST00000556707 DYNC2H1Q8NCM8 4307 aaKnown RBP17.51■□□□□ 0.39
SDR39U1-221ENST00000556707 IFNA7P01567 189 aa17.51■□□□□ 0.39
SDR39U1-221ENST00000556707 ARL2-SNX15V9GYD0 113 aa17.51■□□□□ 0.39
SDR39U1-221ENST00000556707 SULT1A2P50226 295 aa17.5■□□□□ 0.39
SDR39U1-221ENST00000556707 Q6ZQT7 251 aa17.5■□□□□ 0.39
SDR39U1-221ENST00000556707 C2CD4CQ8TF44 421 aa17.5■□□□□ 0.39
SDR39U1-221ENST00000556707 TVP23CQ96ET8 276 aa17.5■□□□□ 0.39
SDR39U1-221ENST00000556707 SGK494Q96LW2 274 aa17.5■□□□□ 0.39
SDR39U1-221ENST00000556707 TIMM8BQ9Y5J9 83 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-221ENST00000556707 FBLL1A6NHQ2 334 aaKnown RBP17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 IGLV2-11P01706 119 aa17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 DAD1P61803 113 aa17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 Q6AWC8 147 aa17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 EIF4E3Q8N5X7 224 aaKnown RBP17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 TMEM75Q8N9X5 138 aa17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 TREM1Q9NP99 234 aa17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 PSG8Q9UQ74 426 aa17.49■□□□□ 0.39
SDR39U1-221ENST00000556707 DEFB131BA0A096LNP1 70 aa17.48■□□□□ 0.39
SDR39U1-221ENST00000556707 A0A1B0GV50 99 aa17.48■□□□□ 0.39
SDR39U1-221ENST00000556707 RGS13O14921 159 aa17.48■□□□□ 0.39
SDR39U1-221ENST00000556707 FLI1Q01543 452 aaPredicted RBP17.48■□□□□ 0.39
SDR39U1-221ENST00000556707 ANXA2RQ3ZCQ2 193 aa17.48■□□□□ 0.39
SDR39U1-221ENST00000556707 CST9LP1Q5W188 147 aa17.48■□□□□ 0.39
SDR39U1-221ENST00000556707 NDFIP1Q9BT67 221 aa17.48■□□□□ 0.39
SDR39U1-221ENST00000556707 IGHV1OR15-1A0A075B7D0 117 aa17.47■□□□□ 0.39
SDR39U1-221ENST00000556707 PEX7O00628 323 aa17.47■□□□□ 0.39
SDR39U1-221ENST00000556707 ZNF680Q8NEM1 530 aa17.47■□□□□ 0.39
SDR39U1-221ENST00000556707 HIST1H2BAQ96A08 127 aa17.47■□□□□ 0.39
SDR39U1-221ENST00000556707 NOP10Q9NPE3 64 aaKnown RBP17.47■□□□□ 0.39
SDR39U1-221ENST00000556707 PLECQ15149 4684 aaKnown RBP17.47■□□□□ 0.39
SDR39U1-221ENST00000556707 TRAV1-1A0A0B4J248 108 aa17.46■□□□□ 0.39
SDR39U1-221ENST00000556707 CBY3A6NI87 242 aa17.46■□□□□ 0.39
SDR39U1-221ENST00000556707 PAGE4O60829 102 aa17.46■□□□□ 0.39
SDR39U1-221ENST00000556707 NKX2-5P52952 324 aaPredicted RBP17.46■□□□□ 0.39
SDR39U1-221ENST00000556707 LCE6AA0A183 80 aa17.45■□□□□ 0.38
SDR39U1-221ENST00000556707 SNURFLB1AK76 121 aa17.45■□□□□ 0.38
SDR39U1-221ENST00000556707 F6UZH7 168 aa17.45■□□□□ 0.38
SDR39U1-221ENST00000556707 PPT1P50897 306 aa17.45■□□□□ 0.38
SDR39U1-221ENST00000556707 PRNTQ86SH4 94 aa17.45■□□□□ 0.38
SDR39U1-221ENST00000556707 LINC00479Q96M42 142 aa17.45■□□□□ 0.38
SDR39U1-221ENST00000556707 TCEAL7Q9BRU2 100 aa17.45■□□□□ 0.38
SDR39U1-221ENST00000556707 LYSTQ99698 3801 aa17.44■□□□□ 0.38
SDR39U1-221ENST00000556707 TRAV34A0A0B4J273 112 aa17.44■□□□□ 0.38
SDR39U1-221ENST00000556707 DEFB130BP0DP73 79 aa17.44■□□□□ 0.38
SDR39U1-221ENST00000556707 DEFB130AP0DP74 79 aa17.44■□□□□ 0.38
SDR39U1-221ENST00000556707 ATP5G3P48201 142 aa17.44■□□□□ 0.38
SDR39U1-221ENST00000556707 C11orf72Q8NBR9 251 aa17.44■□□□□ 0.38
SDR39U1-221ENST00000556707 IGLL5B9A064 214 aa17.43■□□□□ 0.38
SDR39U1-221ENST00000556707 DAZ2Q13117 558 aaKnown RBP17.43■□□□□ 0.38
SDR39U1-221ENST00000556707 C8orf49Q96NF6 230 aa17.43■□□□□ 0.38
SDR39U1-221ENST00000556707 GSN-AS1Q9NRJ2 163 aa17.43■□□□□ 0.38
SDR39U1-221ENST00000556707 TRAV21A0A0B4J279 112 aa17.42■□□□□ 0.38
SDR39U1-221ENST00000556707 TEX46H3BTG2 121 aa17.42■□□□□ 0.38
SDR39U1-221ENST00000556707 TCTAP57738 103 aa17.42■□□□□ 0.38
SDR39U1-221ENST00000556707 MUC21Q5SSG8 566 aa17.42■□□□□ 0.38
SDR39U1-221ENST00000556707 SAPCD1Q5SSQ6 148 aa17.42■□□□□ 0.38
SDR39U1-221ENST00000556707 IBA57Q5T440 356 aaKnown RBP17.42■□□□□ 0.38
SDR39U1-221ENST00000556707 TP53TG3Q9ULZ0 132 aa17.42■□□□□ 0.38
SDR39U1-221ENST00000556707 TCL1AP56279 114 aa17.41■□□□□ 0.38
SDR39U1-221ENST00000556707 CCL20P78556 96 aa17.41■□□□□ 0.38
SDR39U1-221ENST00000556707 FAM159AQ6UWV7 190 aa17.41■□□□□ 0.38
SDR39U1-221ENST00000556707 LINC00612Q8N6U2 182 aa17.41■□□□□ 0.38
SDR39U1-221ENST00000556707 HTN3P15516 51 aa17.4■□□□□ 0.38
SDR39U1-221ENST00000556707 SMUG1Q53HV7 270 aa17.4■□□□□ 0.38
SDR39U1-221ENST00000556707 MANBALQ9NQG1 85 aa17.4■□□□□ 0.38
SDR39U1-221ENST00000556707 BOLA1Q9Y3E2 137 aa17.4■□□□□ 0.38
SDR39U1-221ENST00000556707 KLF12Q9Y4X4 402 aa17.4■□□□□ 0.38
SDR39U1-221ENST00000556707 MUC4Q99102 2169 aa17.4■□□□□ 0.38
SDR39U1-221ENST00000556707 IGHV4-4A0A075B6R2 117 aa17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 GCGP01275 180 aa17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 ZNF80P51504 273 aaPredicted RBP17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 TDRG1Q3Y452 100 aa17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 Q86TA4 180 aa17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 FMC1Q96HJ9 113 aa17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 NAGKQ9UJ70 344 aa17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 APLNQ9ULZ1 77 aa17.39■□□□□ 0.37
SDR39U1-221ENST00000556707 ALKAL2Q6UX46 152 aa17.38■□□□□ 0.37
SDR39U1-221ENST00000556707 GNG13Q9P2W3 67 aa17.38■□□□□ 0.37
SDR39U1-221ENST00000556707 TRGV11A0A075B6L2 103 aa17.37■□□□□ 0.37
SDR39U1-221ENST00000556707 AKR1C3P42330 323 aa17.37■□□□□ 0.37
SDR39U1-221ENST00000556707 ZNF415Q09FC8 603 aa17.37■□□□□ 0.37
SDR39U1-221ENST00000556707 TMEM183BQ1AE95 376 aa17.37■□□□□ 0.37
SDR39U1-221ENST00000556707 TMEM183AQ8IXX5 376 aa17.37■□□□□ 0.37
SDR39U1-221ENST00000556707 FAM210BQ96KR6 192 aa17.37■□□□□ 0.37
SDR39U1-221ENST00000556707 ALMS1Q8TCU4 4167 aa17.36■□□□□ 0.37
SDR39U1-221ENST00000556707 TRBV6-1A0A0K0K1D8 114 aa17.36■□□□□ 0.37
SDR39U1-221ENST00000556707 GAGE12BA1L429 117 aa17.36■□□□□ 0.37
SDR39U1-221ENST00000556707 GAGE7O76087 117 aa17.36■□□□□ 0.37
SDR39U1-221ENST00000556707 ATP5G1P05496 136 aa17.36■□□□□ 0.37
SDR39U1-221ENST00000556707 PFN1P07737 140 aaKnown RBP17.36■□□□□ 0.37
SDR39U1-221ENST00000556707 GAGE12FP0CL80 117 aa17.36■□□□□ 0.37
SDR39U1-221ENST00000556707 GAGE12GP0CL81 117 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms