RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 H3BQ15 152 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 SLC17A3O00476 420 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 RLN2P04090 185 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 BTCP35070 178 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 SEC61BP60468 96 aaKnown RBP6.87□□□□□ -1.31
SCFD1-220ENST00000556486 OPCMLQ14982 345 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 ESRGQ1W209 222 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 MORN5Q5VZ52 161 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 MRPL53Q96EL3 112 aaKnown RBP6.87□□□□□ -1.31
SCFD1-220ENST00000556486 LINC00467Q9BRT7 94 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 FLVCR2Q9UPI3 526 aa6.87□□□□□ -1.31
SCFD1-220ENST00000556486 A0A0J9YY99 117 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 SNURFLB1AK76 121 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 COX7A2P2O60397 106 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 DNAH10OSP0CZ25 163 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 CT45A10P0DMU9 189 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 PRB4P10163 310 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-220ENST00000556486 LINC00315P59091 139 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 PNRC1Q12796 327 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-220ENST00000556486 OR5I1Q13606 314 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 PAPPA-AS1Q5QFB9 102 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 C10orf113Q5VZT2 155 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 TRIQKQ629K1 86 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 ZNF431Q8TF32 576 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-220ENST00000556486 SDHCQ99643 169 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-220ENST00000556486 C11orf1Q9H5F2 150 aa6.86□□□□□ -1.31
SCFD1-220ENST00000556486 LINC00854A0A1B0GVQ3 168 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 KLLNB2CW77 178 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 GAGE7O76087 117 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 SLC25A5P05141 298 aaKnown RBP6.85□□□□□ -1.31
SCFD1-220ENST00000556486 NMBP08949 121 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 GAGE12FP0CL80 117 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 GAGE12GP0CL81 117 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 GAGE12IP0CL82 117 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 LEPP41159 167 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 CAMLGP49069 296 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 RAB31Q13636 194 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 Q6ZRG5 221 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 Q6ZRN7 208 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-220ENST00000556486 C11orf72Q8NBR9 251 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 ZNF680Q8NEM1 530 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 VSIG2Q96IQ7 327 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 FAM19A4Q96LR4 140 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 PFDN5Q99471 154 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 PARD6GQ9BYG4 376 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-220ENST00000556486 WDR83OSQ9Y284 106 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 TNFRSF18Q9Y5U5 241 aa6.85□□□□□ -1.31
SCFD1-220ENST00000556486 A0A096LPF7 62 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 CENPXA8MT69 81 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 ZNF324O75467 553 aaPredicted RBP6.84□□□□□ -1.31
SCFD1-220ENST00000556486 RPL29P47914 159 aaKnown RBP6.84□□□□□ -1.31
SCFD1-220ENST00000556486 INPP1P49441 399 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 PDE6HQ13956 83 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 Q6ZTI0 123 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 Q75L30 129 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 OR1L4Q8NGR5 311 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 TMPRSS5Q9H3S3 457 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 PTTG2Q9NZH5 202 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 GSKIPQ9P0R6 139 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 PRELID1Q9Y255 219 aa6.84□□□□□ -1.31
SCFD1-220ENST00000556486 TRBV19A0A075B6N1 114 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 TRAV12-3A0A0B4J271 114 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 H3BTX0 84 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 PRAF2O60831 178 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 SNRPCP09234 159 aaKnown RBP6.83□□□□□ -1.32
SCFD1-220ENST00000556486 IL7P13232 177 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 CRISP2P16562 243 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 IBA57Q5T440 356 aaKnown RBP6.83□□□□□ -1.32
SCFD1-220ENST00000556486 LINC00477Q96M19 166 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 UQCC1Q9NVA1 299 aa6.83□□□□□ -1.32
SCFD1-220ENST00000556486 hDV102S1A0JD36 115 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 C7orf71A4D174 169 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 SPINK4O60575 86 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 HIST1H1EP10412 219 aaKnown RBP6.82□□□□□ -1.32
SCFD1-220ENST00000556486 TCL1AP56279 114 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 IL15RAQ13261 267 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 ZNF846Q147U1 533 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 MIC13Q5XKP0 118 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 C9orf47Q6ZRZ4 202 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 C12orf45Q8N5I9 185 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-220ENST00000556486 C20orf85Q9H1P6 137 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 LYRM2Q9NU23 88 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-220ENST00000556486 SLC39A9Q9NUM3 307 aa6.82□□□□□ -1.32
SCFD1-220ENST00000556486 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 TRAV5A0A0B4J249 113 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 TRBV7-9A0A0J9YWB2 115 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 CCDC160A6NGH7 325 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 K7EP13 123 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 L7N2F9 121 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 M0R3E3 92 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 MPDU1O75352 247 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 CST7O76096 145 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 IFNA5P01569 189 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 S100A11P31949 105 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 SULT1A1P50225 295 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 CAV2P51636 162 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 EIF4E3Q8N5X7 224 aaKnown RBP6.81□□□□□ -1.32
SCFD1-220ENST00000556486 ST6GAL2Q96JF0 529 aa6.81□□□□□ -1.32
SCFD1-220ENST00000556486 AGPAT4-IT1Q9H0P7 198 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms