RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 NKX6-2Q9C056 277 aaPredicted RBP4.79□□□□□ -1.64
PSEN1-216ENST00000556066 RPRMQ9NS64 109 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 DOK5Q9P104 306 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 CARHSP1Q9Y2V2 147 aaKnown RBP4.79□□□□□ -1.64
PSEN1-216ENST00000556066 GOLT1BQ9Y3E0 138 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 DNAH17Q9UFH2 4485 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 DNAH6Q9C0G6 4158 aa4.79□□□□□ -1.64
PSEN1-216ENST00000556066 A0A0J9YX75 114 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 PRSS46E5RG02 174 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 M0R2N4 97 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 HBE1P02100 147 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 P0DMU3 169 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 FAM231AP0DMU4 169 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 FAM231CP0DMU5 169 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 S100A7P31151 101 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 FAM222AQ5U5X8 452 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 SAMD13Q5VXD3 122 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 SPATA31B1PQ5VZV4 182 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 IGFL4Q6B9Z1 124 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 SSX7Q7RTT5 188 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 UBE2DNLQ8IWF7 75 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 RNF182Q8N6D2 247 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 NIPSNAP3BQ9BS92 247 aa4.78□□□□□ -1.64
PSEN1-216ENST00000556066 WDR61Q9GZS3 305 aaKnown RBP4.78□□□□□ -1.64
PSEN1-216ENST00000556066 YTHDF2Q9Y5A9 579 aaKnown RBP4.78□□□□□ -1.64
PSEN1-216ENST00000556066 FAT2Q9NYQ8 4349 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 TRAV26-1A0A087WT03 109 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 UBE2L5PA0A1B0GUS4 154 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 TEX48A0A1B0GUV7 120 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 UMAD1C9J7I0 102 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 EIF3GO75821 320 aaKnown RBP eCLIP4.77□□□□□ -1.65
PSEN1-216ENST00000556066 OR5G3P0C626 314 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 HBG1P69891 147 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 HBG2P69892 147 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 S100A12P80511 92 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 PEA15Q15121 130 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 ZNF726P1Q15940 193 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 ATP6V1FQ16864 119 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 SPINK13Q1W4C9 94 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 RRN3P1Q2M238 152 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 LBHQ53QV2 105 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-216ENST00000556066 AKR1C8PQ5T2L2 129 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 FAM159AQ6UWV7 190 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 CYP2G1PQ6ZSU1 146 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 TMEM144Q7Z5S9 345 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 C1orf158Q8N1D5 194 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 SVBPQ8N300 66 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 POM121L12Q8N7R1 296 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 ZNF738Q8NE65 137 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 SFT2D1Q8WV19 159 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 GPR82Q96P67 336 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 PSMG3Q9BT73 122 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-216ENST00000556066 SLC25A39Q9BZJ4 359 aaPredicted RBP4.77□□□□□ -1.65
PSEN1-216ENST00000556066 EIF5A2Q9GZV4 153 aaKnown RBP4.77□□□□□ -1.65
PSEN1-216ENST00000556066 FAM30AQ9NZY2 134 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 DKK2Q9UBU2 259 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 HIGD1AQ9Y241 93 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 NACAE9PAV3 2078 aa4.77□□□□□ -1.65
PSEN1-216ENST00000556066 DNAH11Q96DT5 4516 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 IGLV2-18A0A075B6J9 118 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 A0A0U1RRA0 63 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 LOC105371267A0A1B0GV96 52 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 RBFOX3A6NFN3 312 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 ZNF705GA8MUZ8 300 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-216ENST00000556066 H3BRN7 92 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 M0R2Z0 102 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 HYPMO75409 117 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 DUSP14O95147 198 aaKnown RBP4.76□□□□□ -1.65
PSEN1-216ENST00000556066 PRM2P04554 102 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 SRP19P09132 144 aaKnown RBP4.76□□□□□ -1.65
PSEN1-216ENST00000556066 LINC00869P0C866 280 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 PRB4P10163 310 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-216ENST00000556066 RPL7P18124 248 aaKnown RBP4.76□□□□□ -1.65
PSEN1-216ENST00000556066 FGF7P21781 194 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 FGF8P55075 233 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-216ENST00000556066 RAB2AP61019 212 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 DAD1P61803 113 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 RHOBP62745 196 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 ICAM4Q14773 271 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 AMTNQ6UX39 209 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 DPPA3Q6W0C5 159 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 OR10P1Q8NGE3 313 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 IGF2BP2-AS1Q96M15 143 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 C17orf77Q96MU5 243 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 UHRF2Q96PU4 802 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 SHANK2-AS3Q9BTD1 123 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 PARD6GQ9BYG4 376 aaPredicted RBP4.76□□□□□ -1.65
PSEN1-216ENST00000556066 TIMM9Q9Y5J7 89 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 DNAH2Q9P225 4427 aa4.76□□□□□ -1.65
PSEN1-216ENST00000556066 MUC4Q99102 2169 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 TRAV12-2A0A075B6T6 113 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 TRAV8-2A0A0B4J237 113 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 SNAPINO95295 136 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 INSP01308 110 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 SNRPCP09234 159 aaKnown RBP4.75□□□□□ -1.65
PSEN1-216ENST00000556066 DEFB130BP0DP73 79 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 DEFB130AP0DP74 79 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 HTN1P15515 57 aa4.75□□□□□ -1.65
PSEN1-216ENST00000556066 SELENOTP62341 195 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms