RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 TEX49A0A1B0GTD5 131 aa11.34□□□□□ -0.59
SIX1-205ENST00000555955 ORM1P02763 201 aa11.34□□□□□ -0.59
SIX1-205ENST00000555955 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
SIX1-205ENST00000555955 TRAV12-1A0A0B4J245 112 aa11.34□□□□□ -0.59
SIX1-205ENST00000555955 IGHV1-2P23083 117 aa11.34□□□□□ -0.59
SIX1-205ENST00000555955 FOXC1Q12948 553 aa11.34□□□□□ -0.59
SIX1-205ENST00000555955 PLGLAQ15195 96 aa11.34□□□□□ -0.59
SIX1-205ENST00000555955 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
SIX1-205ENST00000555955 KLK15Q9H2R5 256 aa11.33□□□□□ -0.6
SIX1-205ENST00000555955 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
SIX1-205ENST00000555955 OOSP1A8MZH6 123 aa11.33□□□□□ -0.6
SIX1-205ENST00000555955 MZT1Q08AG7 82 aa11.33□□□□□ -0.6
SIX1-205ENST00000555955 IL11RAQ14626 422 aa11.33□□□□□ -0.6
SIX1-205ENST00000555955 KLK5Q9Y337 293 aaPredicted RBP11.33□□□□□ -0.6
SIX1-205ENST00000555955 A4D1N5 150 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 SHANK2-AS3Q9BTD1 123 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
SIX1-205ENST00000555955 TRAV25A0A0B4J276 109 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
SIX1-205ENST00000555955 CCL4P13236 92 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 ZNF575Q86XF7 245 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 DEFB108BQ8NET1 73 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 TMEM190Q8WZ59 177 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 TTTY12Q9BZ98 90 aa11.32□□□□□ -0.6
SIX1-205ENST00000555955 FAM19A5Q7Z5A7 132 aaPredicted RBP11.31□□□□□ -0.6
SIX1-205ENST00000555955 Q8TAT8 98 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 ICE1Q9Y2F5 2266 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 TECTAO75443 2155 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 H7C2G1 150 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
SIX1-205ENST00000555955 IGLV2-23P01705 113 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 HLA-DMBP28068 263 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 CNFNQ9BYD5 112 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 DSPP15924 2871 aaKnown RBP11.31□□□□□ -0.6
SIX1-205ENST00000555955 TRAV26-2A0A0B4J265 109 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 COX6B1P14854 86 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 SCGB3A1Q96QR1 104 aa11.31□□□□□ -0.6
SIX1-205ENST00000555955 TIMM23O14925 209 aa11.3□□□□□ -0.6
SIX1-205ENST00000555955 A0A0J9YY99 117 aa11.3□□□□□ -0.6
SIX1-205ENST00000555955 VMA21Q3ZAQ7 101 aa11.3□□□□□ -0.6
SIX1-205ENST00000555955 CD40P25942 277 aa11.29□□□□□ -0.6
SIX1-205ENST00000555955 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
SIX1-205ENST00000555955 TMEM105Q8N8V8 129 aa11.29□□□□□ -0.6
SIX1-205ENST00000555955 H3BRN7 92 aa11.29□□□□□ -0.6
SIX1-205ENST00000555955 ZNF56Q15929 161 aa11.29□□□□□ -0.6
SIX1-205ENST00000555955 NEXN-AS1Q8NBZ9 246 aa11.29□□□□□ -0.6
SIX1-205ENST00000555955 DCHS1Q96JQ0 3298 aa11.29□□□□□ -0.6
SIX1-205ENST00000555955 EMP1P54849 157 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 NRACQ8N912 160 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 CCL13Q99616 98 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 IGKV1-17P01599 117 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 IGKV3-15P01624 115 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 IGHV3-30P01768 117 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 TRGV3P03979 118 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 CECR9P0C854 216 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 IGHV3-30-5P0DP03 117 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 RPL13AP40429 203 aaKnown RBP11.28□□□□□ -0.6
SIX1-205ENST00000555955 RPL27AP46776 148 aaKnown RBP11.28□□□□□ -0.6
SIX1-205ENST00000555955 ADIPOQQ15848 244 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 FAM216BQ8N7L0 139 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 U3KQA8 63 aa11.28□□□□□ -0.6
SIX1-205ENST00000555955 LGALS9O00182 355 aa11.27□□□□□ -0.6
SIX1-205ENST00000555955 MRPS12O15235 138 aaKnown RBP11.27□□□□□ -0.6
SIX1-205ENST00000555955 HES1Q14469 280 aa11.27□□□□□ -0.6
SIX1-205ENST00000555955 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.6
SIX1-205ENST00000555955 COX8CQ7Z4L0 72 aa11.27□□□□□ -0.6
SIX1-205ENST00000555955 CADP27708 2225 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 LHBP01229 141 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 MRGPRG-AS1Q2M3A8 158 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 C9orf153Q5TBE3 101 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 Q6ZS46 218 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 TIMD4Q96H15 378 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 H3BMM0 161 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 NPFFO15130 113 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 ENSAO43768 121 aaKnown RBP11.27□□□□□ -0.61
SIX1-205ENST00000555955 LY6DQ14210 128 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 LINC01620Q4KN68 170 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 UBE2WQ96B02 151 aa11.27□□□□□ -0.61
SIX1-205ENST00000555955 CACNA1EQ15878 2313 aa11.26□□□□□ -0.61
SIX1-205ENST00000555955 TM4SF5O14894 197 aa11.26□□□□□ -0.61
SIX1-205ENST00000555955 SPRY3O43610 288 aa11.26□□□□□ -0.61
SIX1-205ENST00000555955 IGHV4-39P01824 125 aa11.26□□□□□ -0.61
SIX1-205ENST00000555955 WT1P19544 449 aaPredicted RBP11.26□□□□□ -0.61
SIX1-205ENST00000555955 TMEM30BQ3MIR4 351 aa11.26□□□□□ -0.61
SIX1-205ENST00000555955 BAALCQ8WXS3 180 aa11.26□□□□□ -0.61
SIX1-205ENST00000555955 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
SIX1-205ENST00000555955 M0R2P5 195 aa11.25□□□□□ -0.61
SIX1-205ENST00000555955 NDUFA7O95182 113 aa11.25□□□□□ -0.61
SIX1-205ENST00000555955 HERVK_113P63121 156 aa11.25□□□□□ -0.61
SIX1-205ENST00000555955 ATXN8Q156A1 80 aa11.25□□□□□ -0.61
SIX1-205ENST00000555955 GAFA1Q96PS6 74 aa11.25□□□□□ -0.61
SIX1-205ENST00000555955 IGHV3-33P01772 117 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 ELANEP08246 267 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 PDE6HQ13956 83 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 ZNF491Q8N8L2 437 aa11.24□□□□□ -0.61
SIX1-205ENST00000555955 RNF125Q96EQ8 232 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms