RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ZNF443Q9Y2A4 671 aaPredicted RBP2.13□□□□□ -2.07
SRP54-209ENST00000555746 AMMECR1Q9Y4X0 333 aaPredicted RBP2.13□□□□□ -2.07
SRP54-209ENST00000555746 MPC1Q9Y5U8 109 aa2.13□□□□□ -2.07
SRP54-209ENST00000555746 SLC25A15Q9Y619 301 aa2.13□□□□□ -2.07
SRP54-209ENST00000555746 TRBV6-6A0A0A6YYG2 114 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 LOC389332A0A1B0GUA5 103 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 TCRBV3S1A0A5B6 114 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 A6NDX4 124 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 ZNF705GA8MUZ8 300 aaPredicted RBP2.12□□□□□ -2.07
SRP54-209ENST00000555746 LY6LH3BQJ8 138 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 PSPHP1O15172 72 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 PGLYRP1O75594 196 aaPredicted RBP2.12□□□□□ -2.07
SRP54-209ENST00000555746 IGLC1P0CG04 106 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 IFITM1P13164 125 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 CRYGSP22914 178 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 PSMB8P28062 276 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 BTCP35070 178 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 OPRK1P41145 380 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 TMEM258P61165 79 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 KLRD1Q13241 179 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 KHDC3LQ587J8 217 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 C10orf91Q5T1B1 145 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 TMEM236Q5W0B7 351 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 LCN12Q6JVE5 192 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 MRPL54Q6P161 138 aaKnown RBP2.12□□□□□ -2.07
SRP54-209ENST00000555746 AMTNQ6UX39 209 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 CLEC20AQ6ZU45 233 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 CAMK2N1Q7Z7J9 78 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 Q8N9W7 124 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 BPIFB6Q8NFQ5 453 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 OR11H7Q8NGC8 314 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 OR10AC1Q8NH08 325 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 OR4K13Q8NH42 304 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 RPS4Y2Q8TD47 263 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 ZNF431Q8TF32 576 aaPredicted RBP2.12□□□□□ -2.07
SRP54-209ENST00000555746 CARD19Q96LW7 228 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 OR2A5Q96R48 311 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 GPX7Q96SL4 187 aaPredicted RBP2.12□□□□□ -2.07
SRP54-209ENST00000555746 LINC01587Q99440 93 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 SDF2Q99470 211 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 SNRNP25Q9BV90 132 aaKnown RBP2.12□□□□□ -2.07
SRP54-209ENST00000555746 AICDAQ9GZX7 198 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 MARCOQ9UEW3 520 aaPredicted RBP2.12□□□□□ -2.07
SRP54-209ENST00000555746 LINC00527Q9UJ94 153 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 HEBP2Q9Y5Z4 205 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 ENPP4Q9Y6X5 453 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 ABCA13Q86UQ4 5058 aa2.12□□□□□ -2.07
SRP54-209ENST00000555746 TRAV9-1A0A075B6T8 112 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 TRGV10A0A0A0MS01 117 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 IGHV2-26A0A0B4J1V2 119 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 TRBV7-6A0A0J9YX20 115 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 IRGMA1A4Y4 181 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 IZUMO1RA6ND01 250 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 ARRDC5A6NEK1 342 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 CD300LBA8K4G0 201 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 H3BQ15 152 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 M0R233 179 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 FFAR1O14842 300 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 KLF7O75840 302 aaPredicted RBP2.11□□□□□ -2.07
SRP54-209ENST00000555746 TRBV12-3P01733 135 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 TRGC2P03986 189 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 SEC11BP0C7V7 166 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 CECR9P0C854 216 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 FABP4P15090 132 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 NFYBP25208 207 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 CRYBB3P26998 211 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 CD70P32970 193 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 SDC2P34741 201 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 OPRM1P35372 400 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 P2RX1P51575 399 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 CRISP3P54108 245 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 FOXA1P55317 472 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 MP68P56378 58 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 RPS11P62280 158 aaKnown RBP eCLIP2.11□□□□□ -2.07
SRP54-209ENST00000555746 HERVK_113P63121 156 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 PRR3P79522 188 aaKnown RBP2.11□□□□□ -2.07
SRP54-209ENST00000555746 AKR1C1Q04828 323 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 HMGN3Q15651 99 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 UBE2NLQ5JXB2 153 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 NXNL2Q5VZ03 156 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 ZNF880Q6PDB4 577 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 ALKAL2Q6UX46 152 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 Q6ZS49 121 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 TRAPPC6BQ86SZ2 158 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 RPS19BP1Q86WX3 136 aaKnown RBP2.11□□□□□ -2.07
SRP54-209ENST00000555746 MSRB3Q8IXL7 192 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 SLC22A24Q8N4F4 322 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 YIPF7Q8N8F6 280 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 C11orf72Q8NBR9 251 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 OR2T10Q8NGZ9 312 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 BRK1Q8WUW1 75 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 COPS9Q8WXC6 57 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 RAB37Q96AX2 223 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 FXYD5Q96DB9 178 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 NEURL3Q96EH8 262 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 GNPNAT1Q96EK6 184 aaPredicted RBP2.11□□□□□ -2.07
SRP54-209ENST00000555746 PEBP4Q96S96 227 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 SPIN2AQ99865 258 aa2.11□□□□□ -2.07
SRP54-209ENST00000555746 SPIN2BQ9BPZ2 258 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms