RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 RPP21Q9H633 154 aaKnown RBP7.46□□□□□ -1.22
PSEN1-213ENST00000555386 ZNF586Q9NXT0 402 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 UFC1Q9Y3C8 167 aa7.46□□□□□ -1.22
PSEN1-213ENST00000555386 PRKDCP78527 4128 aaKnown RBP7.46□□□□□ -1.22
PSEN1-213ENST00000555386 TRBV19A0A075B6N1 114 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 TMEM213A2RRL7 107 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 C19orf71A6NCJ1 209 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 K7EQM0 130 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 LGALS9O00182 355 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 SERF1AO75920 110 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 IGLC2P0DOY2 106 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 TCL1AP56279 114 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 LINC00310P59036 64 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 ADAMTSL5Q6ZMM2 481 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 TMEM75Q8N9X5 138 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 NUP35Q8NFH5 326 aa7.45□□□□□ -1.22
PSEN1-213ENST00000555386 IGKV3-7A0A075B6H7 116 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 SERTM2A0A1B0GWG4 89 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 NPIPB6E9PJ23 425 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 NUPR1O60356 82 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 P01737 135 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 IL4P05112 153 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 FRMD6-AS1P0C7T7 363 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 LEMD1Q68G75 181 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 MRPL54Q6P161 138 aaKnown RBP7.44□□□□□ -1.22
PSEN1-213ENST00000555386 Q86TA4 180 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 DAZAP1Q96EP5 407 aaKnown RBP7.44□□□□□ -1.22
PSEN1-213ENST00000555386 ZNF414Q96IQ9 312 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 ATP6V0BQ99437 205 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 NEU1Q99519 415 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 DAZ1Q9NQZ3 744 aaKnown RBP7.44□□□□□ -1.22
PSEN1-213ENST00000555386 NAGKQ9UJ70 344 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 ZFP30Q9Y2G7 519 aa7.44□□□□□ -1.22
PSEN1-213ENST00000555386 A0A1B0GXF2 115 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 FBLL1A6NHQ2 334 aaKnown RBP7.43□□□□□ -1.22
PSEN1-213ENST00000555386 HIGD1CA8MV81 97 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 A8MWP6 167 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 MRPS12O15235 138 aaKnown RBP7.43□□□□□ -1.22
PSEN1-213ENST00000555386 SPINK4O60575 86 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 SCGB1D1O95968 90 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 CA1P00915 261 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-213ENST00000555386 INSL3P51460 131 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 CD300EQ496F6 205 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-213ENST00000555386 LBHQ53QV2 105 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-213ENST00000555386 FAM162BQ5T6X4 162 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 PRR27Q6MZM9 219 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 ZNF664Q8N3J9 261 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 KCNS1Q96KK3 526 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 SAMD10Q9BYL1 202 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 ZNF253O75346 499 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 IGLV1-51P01701 117 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 IGLV2-11P01706 119 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 APOHP02749 345 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-213ENST00000555386 GPX1P07203 203 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 SRIP30626 198 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 HBBP68871 147 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 PSG9Q00887 426 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 DEFB114Q30KQ6 69 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 DEFB121Q5J5C9 76 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 C16orf54Q6UWD8 224 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 SIGLEC15Q6ZMC9 328 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 METTL26Q96S19 204 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 RHPN1-AS1Q9BWJ2 59 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 RPH3ALQ9UNE2 315 aa7.43□□□□□ -1.22
PSEN1-213ENST00000555386 ZNF256Q9Y2P7 627 aaPredicted RBP7.43□□□□□ -1.22
PSEN1-213ENST00000555386 IGHV7-4-1A0A0J9YVY3 117 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 SNRPCP09234 159 aaKnown RBP7.42□□□□□ -1.22
PSEN1-213ENST00000555386 RPL7P18124 248 aaKnown RBP7.42□□□□□ -1.22
PSEN1-213ENST00000555386 TFPI2P48307 235 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-213ENST00000555386 RPL11P62913 178 aaKnown RBP7.42□□□□□ -1.22
PSEN1-213ENST00000555386 C1orf194Q5T5A4 169 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 KPRPQ5T749 579 aaPredicted RBP7.42□□□□□ -1.22
PSEN1-213ENST00000555386 RBPMS2Q6ZRY4 209 aaKnown RBP7.42□□□□□ -1.22
PSEN1-213ENST00000555386 GOLT1AQ6ZVE7 132 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 Q6ZWC4 215 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 C14orf144Q96I85 54 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 NDUFAF3Q9BU61 184 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 PRO1933Q9H354 126 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 AAMDCQ9H7C9 122 aa7.42□□□□□ -1.22
PSEN1-213ENST00000555386 KIR2DL5BA0A0G2JN68 375 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 KIR2DL5BA0A0G2JPC4 375 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 H3BTX0 84 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 K7EMT4 169 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 CHEK1O14757 476 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 ZNF324O75467 553 aaPredicted RBP7.41□□□□□ -1.22
PSEN1-213ENST00000555386 EGFEM1PQ0D2K5 195 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 SLAQ13239 276 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 PSG3Q16557 428 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 LCN12Q6JVE5 192 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 TEX43Q6ZNM6 134 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 TMEM61Q8N0U2 210 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 KIR2DL5AQ8N109 375 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 EXOC3-AS1Q8N2X6 119 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 C18orf32Q8TCD1 76 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 MRAPQ8TCY5 172 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 SMPXQ9UHP9 88 aa7.41□□□□□ -1.22
PSEN1-213ENST00000555386 A0A1B0GW15 77 aa7.4□□□□□ -1.22
PSEN1-213ENST00000555386 A0A1W2PS18 150 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms