RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 IGKV3-20P01619 116 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 GNG4P50150 75 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 FLI1Q01543 452 aaPredicted RBP8.01□□□□□ -1.13
SHMT2-218ENST00000555213 ADIRFQ15847 76 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 RNF212Q495C1 297 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 GDF5OSQ5U4N7 250 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 COX8CQ7Z4L0 72 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 ZNF575Q86XF7 245 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 NHLRC2Q8NBF2 726 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 OR8A1Q8NGG7 326 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 YPEL4Q96NS1 127 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 CLUHP3Q96NS8 147 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 TM2D3Q9BRN9 247 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 RPS10P5Q9NQ39 176 aa8.01□□□□□ -1.13
SHMT2-218ENST00000555213 DNAH3Q8TD57 4116 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 SERTM2A0A1B0GWG4 89 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 RBAKDNA6NC62 111 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 ZNF705DP0CH99 300 aaPredicted RBP8□□□□□ -1.13
SHMT2-218ENST00000555213 ZNF705BP0CI00 300 aaPredicted RBP8□□□□□ -1.13
SHMT2-218ENST00000555213 BTN1A1Q13410 526 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 RHEBQ15382 184 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 DEFB135Q30KP9 77 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 PRNTQ86SH4 94 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 Q86TA4 180 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 TMEM183AQ8IXX5 376 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 RCHY1Q96PM5 261 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 TP53TG1Q9Y2A0 90 aa8□□□□□ -1.13
SHMT2-218ENST00000555213 AMBPP02760 352 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 TMEM88Q6PEY1 159 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 CBLN2Q8IUK8 224 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 FAM19A4Q96LR4 140 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 C8orf49Q96NF6 230 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 TMEM242Q9NWH2 141 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 ZFP30Q9Y2G7 519 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 U3KQK5 164 aa7.99□□□□□ -1.13
SHMT2-218ENST00000555213 C19orf71A6NCJ1 209 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 COLCA2A8K830 154 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 NPIPB6E9PJ23 425 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 SPRY2O43597 315 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 PFN1P07737 140 aaKnown RBP7.98□□□□□ -1.13
SHMT2-218ENST00000555213 CT45A10P0DMU9 189 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 TSPOP30536 169 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 ZNF80P51504 273 aaPredicted RBP7.98□□□□□ -1.13
SHMT2-218ENST00000555213 UBE2G1P62253 170 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 NUDT10Q8NFP7 164 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 SMIM12Q96EX1 92 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 NUDT11Q96G61 164 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 SFRP2Q96HF1 295 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 CTDSP1Q9GZU7 261 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 RETNQ9HD89 108 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 OSTCQ9NRP0 149 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 ZNF492Q9P255 531 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 V9GYV3 84 aa7.98□□□□□ -1.13
SHMT2-218ENST00000555213 FBLL1A6NHQ2 334 aaKnown RBP7.97□□□□□ -1.13
SHMT2-218ENST00000555213 A8MTW9 85 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 K7EQM0 130 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 INSP01308 110 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 LEPP41159 167 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 TMEM78Q5T7P6 136 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 FAM231DQ6ZW35 169 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 Q8TAT8 98 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 RNF183Q96D59 192 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 ODF3Q96PU9 254 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 RNASE7Q9H1E1 156 aaKnown RBP7.97□□□□□ -1.13
SHMT2-218ENST00000555213 XCL2Q9UBD3 114 aa7.97□□□□□ -1.13
SHMT2-218ENST00000555213 MT-ND4LP03901 98 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 MGST1P10620 155 aaKnown RBP7.96□□□□□ -1.14
SHMT2-218ENST00000555213 ZNF138P52744 262 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 SPINK13Q1W4C9 94 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 AMTNQ6UX39 209 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 Q6ZQT7 251 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 OR10G8Q8NGN5 311 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 ANAPC16Q96DE5 110 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 OVOL2Q9BRP0 275 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 SMCO4Q9NRQ5 59 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 GOLT1BQ9Y3E0 138 aa7.96□□□□□ -1.14
SHMT2-218ENST00000555213 CXorf65A6NEN9 183 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 M0R2Z0 102 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 CDKN1BP46527 198 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 FXYD7P58549 80 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 ELOBQ15370 118 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 SAPCD1Q5SSQ6 148 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 PRR9Q5T870 116 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 ZFAND2AQ8N6M9 145 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 OR11H2Q8NH07 326 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 PYGO2Q9BRQ0 406 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 TMEM208Q9BTX3 173 aa7.95□□□□□ -1.14
SHMT2-218ENST00000555213 AGRNO00468 2067 aa7.94□□□□□ -1.14
SHMT2-218ENST00000555213 GIG44P09565 113 aaPredicted RBP7.94□□□□□ -1.14
SHMT2-218ENST00000555213 ERVFC1-1P60608 527 aa7.94□□□□□ -1.14
SHMT2-218ENST00000555213 KIR3DS1Q14943 382 aa7.94□□□□□ -1.14
SHMT2-218ENST00000555213 C11orf21Q9P2W6 132 aa7.94□□□□□ -1.14
SHMT2-218ENST00000555213 PRKDCP78527 4128 aaKnown RBP7.93□□□□□ -1.14
SHMT2-218ENST00000555213 IGHV3OR16-12A0A075B7B8 117 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 TRBV7-9A0A0J9YWB2 115 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 H7BYZ3 331 aa7.93□□□□□ -1.14
SHMT2-218ENST00000555213 PPP1R2P9O14990 202 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms