RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 ZC2HC1AQ96GY0 325 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 C8orf49Q96NF6 230 aa10.61□□□□□ -0.71
SHOX2-206ENST00000554685 FABP5P3A8MUU1 101 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 KLLNB2CW77 178 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 G3V4G9 280 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 K7EN84 100 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 MT-ND4LP03901 98 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 PRR27Q6MZM9 219 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 FAM231DQ6ZW35 169 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 DEFB125Q8N687 156 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 ZFAND2AQ8N6M9 145 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 SFRP2Q96HF1 295 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 SRD5A3Q9H8P0 318 aa10.6□□□□□ -0.71
SHOX2-206ENST00000554685 AURKAIP1Q9NWT8 199 aaPredicted RBP10.6□□□□□ -0.71
SHOX2-206ENST00000554685 TRAV21A0A0B4J279 112 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 C7orf71A4D174 169 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
SHOX2-206ENST00000554685 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 OR5I1Q13606 314 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 SPINK13Q1W4C9 94 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 IBA57Q5T440 356 aaKnown RBP10.59□□□□□ -0.71
SHOX2-206ENST00000554685 Q8N1Y9 231 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 ANAPC16Q96DE5 110 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 C1QTNF4Q9BXJ3 329 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 WFDC10AQ9H1F0 79 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 TUBA4BQ9H853 241 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 OSTCQ9NRP0 149 aa10.59□□□□□ -0.71
SHOX2-206ENST00000554685 P01737 135 aa10.58□□□□□ -0.72
SHOX2-206ENST00000554685 KRTAP10-11P60412 298 aa10.58□□□□□ -0.72
SHOX2-206ENST00000554685 Q6AWC8 147 aa10.58□□□□□ -0.72
SHOX2-206ENST00000554685 OR10G8Q8NGN5 311 aa10.58□□□□□ -0.72
SHOX2-206ENST00000554685 C20orf144Q9BQM9 153 aa10.58□□□□□ -0.72
SHOX2-206ENST00000554685 CTDSP1Q9GZU7 261 aa10.58□□□□□ -0.72
SHOX2-206ENST00000554685 A0A087WWC5 75 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 LOC102724200A0A096LPH7 203 aaPredicted RBP10.57□□□□□ -0.72
SHOX2-206ENST00000554685 C7orf77A4D0Y5 90 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 C19orf71A6NCJ1 209 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 RBMY1BA6NDE4 496 aaKnown RBP10.57□□□□□ -0.72
SHOX2-206ENST00000554685 RBMY1EA6NEQ0 496 aaKnown RBP10.57□□□□□ -0.72
SHOX2-206ENST00000554685 J3KRW8 73 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 M0R2Z0 102 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 GATCO43716 136 aaKnown RBP10.57□□□□□ -0.72
SHOX2-206ENST00000554685 SH2D1AO60880 128 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 INSP01308 110 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 RBMY1DP0C7P1 496 aaKnown RBP10.57□□□□□ -0.72
SHOX2-206ENST00000554685 RNASE4P34096 147 aaKnown RBP10.57□□□□□ -0.72
SHOX2-206ENST00000554685 RPS10P5Q9NQ39 176 aa10.57□□□□□ -0.72
SHOX2-206ENST00000554685 XKRY2A2RUG3 117 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 H7BYZ3 331 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 RPL35AP18077 110 aaKnown RBP10.56□□□□□ -0.72
SHOX2-206ENST00000554685 ZNF80P51504 273 aaPredicted RBP10.56□□□□□ -0.72
SHOX2-206ENST00000554685 APOC4P55056 127 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 RPS20P60866 119 aaKnown RBP10.56□□□□□ -0.72
SHOX2-206ENST00000554685 BTN1A1Q13410 526 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 RNF212Q495C1 297 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 CT83Q5H943 113 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 KPRPQ5T749 579 aaPredicted RBP10.56□□□□□ -0.72
SHOX2-206ENST00000554685 GFI1BQ5VTD9 330 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 NUDT10Q8NFP7 164 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 NUDT11Q96G61 164 aa10.56□□□□□ -0.72
SHOX2-206ENST00000554685 RNASE7Q9H1E1 156 aaKnown RBP10.56□□□□□ -0.72
SHOX2-206ENST00000554685 RPP21Q9H633 154 aaKnown RBP10.56□□□□□ -0.72
SHOX2-206ENST00000554685 NOTCH3Q9UM47 2321 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 KIR2DL5BA0A0G2JN68 375 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 KIR2DL5BA0A0G2JPC4 375 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 ZNF705GA8MUZ8 300 aaPredicted RBP10.55□□□□□ -0.72
SHOX2-206ENST00000554685 A8MZ25 164 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 CRIP1P50238 77 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 FXYD7P58549 80 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 PRR9Q5T870 116 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 KIR2DL5AQ8N109 375 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 TMEM256Q8N2U0 113 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 KIR2DL5BQ8NHK3 375 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 CSTL1Q9H114 145 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 TMEM242Q9NWH2 141 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 SORL1Q92673 2214 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 TRRAPQ9Y4A5 3859 aa10.55□□□□□ -0.72
SHOX2-206ENST00000554685 TRAV12-2A0A075B6T6 113 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 TRAV12-3A0A0B4J271 114 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 TMEM189A5PLL7 270 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 A8MWL6 223 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 ORM1P02763 201 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 IGHV4-30-4P0DP06 118 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 LINC00322Q6ZN03 302 aaPredicted RBP10.54□□□□□ -0.72
SHOX2-206ENST00000554685 OR2D3Q8NGH3 330 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 KCNS1Q96KK3 526 aa10.54□□□□□ -0.72
SHOX2-206ENST00000554685 UBE2CO00762 179 aa10.53□□□□□ -0.72
SHOX2-206ENST00000554685 CRXO43186 299 aaPredicted RBP10.53□□□□□ -0.72
SHOX2-206ENST00000554685 CA1P00915 261 aaPredicted RBP10.53□□□□□ -0.72
SHOX2-206ENST00000554685 CXCL1P09341 107 aa10.53□□□□□ -0.72
SHOX2-206ENST00000554685 FAM159AQ6UWV7 190 aa10.53□□□□□ -0.72
SHOX2-206ENST00000554685 XCL2Q9UBD3 114 aa10.53□□□□□ -0.72
SHOX2-206ENST00000554685 GOLT1BQ9Y3E0 138 aa10.53□□□□□ -0.72
SHOX2-206ENST00000554685 V9GYV3 84 aa10.53□□□□□ -0.72
SHOX2-206ENST00000554685 ZNF324O75467 553 aaPredicted RBP10.52□□□□□ -0.73
SHOX2-206ENST00000554685 KIR3DS1Q14943 382 aa10.52□□□□□ -0.73
SHOX2-206ENST00000554685 PYGO2Q9BRQ0 406 aa10.52□□□□□ -0.73
SHOX2-206ENST00000554685 TMEM208Q9BTX3 173 aa10.52□□□□□ -0.73
SHOX2-206ENST00000554685 NAGKQ9UJ70 344 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms