RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 TCRAP04437 139 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 ZNF688P0C7X2 276 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 CSN1S1P47710 185 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 GNG4P50150 75 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 UBE2G1P62253 170 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 RPL11P62913 178 aaKnown RBP7.65□□□□□ -1.18
SHMT2-215ENST00000554656 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 STHQ8IWL8 128 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 DCANP1Q8TF63 244 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 ANAPC16Q96DE5 110 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 IGF2BP2-AS1Q96M15 143 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 DERL1Q9BUN8 251 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 RPS10P5Q9NQ39 176 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 SMCO4Q9NRQ5 59 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 APLNQ9ULZ1 77 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 X6R8D5 127 aa7.65□□□□□ -1.18
SHMT2-215ENST00000554656 SLC17A3O00476 420 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 SCO1O75880 301 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 ADIRFQ15847 76 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 CENPWQ5EE01 88 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 TMEM75Q8N9X5 138 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 ISOC2Q96AB3 205 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 C17orf77Q96MU5 243 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 BIN3Q9NQY0 253 aa7.64□□□□□ -1.19
SHMT2-215ENST00000554656 RBAKDNA6NC62 111 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 IGLL5B9A064 214 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 DIRC3C9JPN6 131 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 H3BTX0 84 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 BTN1A1Q13410 526 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 Q6ZTC4 211 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 EXOC3-AS1Q8N2X6 119 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 CSNK1G2-AS1Q8NCQ2 148 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 OCC1Q8TAD7 63 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 CELA1Q9UNI1 258 aa7.63□□□□□ -1.19
SHMT2-215ENST00000554656 ISLRO14498 428 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 GCGP01275 180 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 LTAP01374 205 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 IGLV2-8P01709 118 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 HLA-DMBP28068 263 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 GNG5P63218 68 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 RNF212Q495C1 297 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 ACTL10Q5JWF8 245 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 FAM231DQ6ZW35 169 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 BAGE2Q86Y30 109 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 C15orf54Q8N8G6 183 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 OSTCQ9NRP0 149 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 ZFP30Q9Y2G7 519 aa7.62□□□□□ -1.19
SHMT2-215ENST00000554656 H7BYZ3 331 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 SNRPCP09234 159 aaKnown RBP7.61□□□□□ -1.19
SHMT2-215ENST00000554656 MIFP14174 115 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 TCTAP57738 103 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 FLI1Q01543 452 aaPredicted RBP7.61□□□□□ -1.19
SHMT2-215ENST00000554656 PSG3Q16557 428 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 MORN3Q6PF18 240 aaPredicted RBP7.61□□□□□ -1.19
SHMT2-215ENST00000554656 GOLT1AQ6ZVE7 132 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 COX8CQ7Z4L0 72 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 Q86TA4 180 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 SFRP2Q96HF1 295 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 BTF3L4Q96K17 158 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 IMMP2LQ96T52 175 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 MLST8Q9BVC4 326 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 PPP1R14DQ9NXH3 145 aa7.61□□□□□ -1.19
SHMT2-215ENST00000554656 IGHV4-4A0A075B6R2 117 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 TRAV8-2A0A0B4J237 113 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 M0R3E3 92 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 SOCS3O14543 225 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 IGLV2-11P01706 119 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 ID1P41134 155 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 PSMG4Q5JS54 123 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 TMEM88Q6PEY1 159 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 CBLN2Q8IUK8 224 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 TMEM183AQ8IXX5 376 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 OR10G8Q8NGN5 311 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 C16orf92Q96LL3 132 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 ZNF492Q9P255 531 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 RPH3ALQ9UNE2 315 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 PSG8Q9UQ74 426 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 KIAA1109Q2LD37 5005 aa7.6□□□□□ -1.19
SHMT2-215ENST00000554656 FAT2Q9NYQ8 4349 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 PKHD1P08F94 4074 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 TRAV9-1A0A075B6T8 112 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 TRAV10A0A0B4J240 114 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 TRAV34A0A0B4J273 112 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 PGPEP1LA6NFU8 196 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 K7EN84 100 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 C12orf74Q32Q52 190 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 SAPCD1Q5SSQ6 148 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 LINC00479Q96M42 142 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 LENEPQ9Y5L5 61 aa7.59□□□□□ -1.19
SHMT2-215ENST00000554656 TRBV24-1A0A075B6N3 115 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 H3BMM0 161 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 S100PP25815 95 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 DEFB1P60022 68 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 CT83Q5H943 113 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 KCNIP4Q6PIL6 250 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 C9orf47Q6ZRZ4 202 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 YPEL4Q96NS1 127 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 NDFIP1Q9BT67 221 aa7.58□□□□□ -1.2
SHMT2-215ENST00000554656 XCL2Q9UBD3 114 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms