RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PLECQ15149 4684 aaKnown RBP6.52□□□□□ -1.37
TDP1-208ENST00000553989 IGHV3-49A0A0A0MS15 119 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 CORTO00230 105 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 CRYBB3P26998 211 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 NANOS2P60321 138 aaKnown RBP6.51□□□□□ -1.37
TDP1-208ENST00000553989 RELQ04864 619 aaPredicted RBP6.51□□□□□ -1.37
TDP1-208ENST00000553989 WT1-ASQ06250 92 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 OR10J3Q5JRS4 329 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 LGALS9CQ6DKI2 356 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 MIR17HGQ75NE6 70 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 ZNF664Q8N3J9 261 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 THAP8Q8NA92 274 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 C11orf45Q8TAV5 145 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 DERL1Q9BUN8 251 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 KRTAP17-1Q9BYP8 105 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 CSTL1Q9H114 145 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 RNF24Q9Y225 148 aa6.51□□□□□ -1.37
TDP1-208ENST00000553989 F11RQ9Y624 299 aaKnown RBP6.51□□□□□ -1.37
TDP1-208ENST00000553989 TRBV20OR9-2A0A075B6H5 130 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 K7EMT4 169 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 COX7A2P2O60397 106 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 OR7C2O60412 319 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 CMC4P56277 68 aaPredicted RBP6.5□□□□□ -1.37
TDP1-208ENST00000553989 ZNF124Q15973 351 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 C10orf113Q5VZT2 155 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 SPATA31B1PQ5VZV4 182 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 PVRIGQ6DKI7 326 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 BAGE3Q86Y29 109 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 BAGE2Q86Y30 109 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 ZNF114Q8NC26 417 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 TMEM116Q8NCL8 245 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 OR11H2Q8NH07 326 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 MISP3Q96FF7 219 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 GRAMD2BQ96HH9 432 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 RHPN1-AS1Q9BWJ2 59 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 ZNF331Q9NQX6 463 aaPredicted RBP6.5□□□□□ -1.37
TDP1-208ENST00000553989 SMPXQ9UHP9 88 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 NAGKQ9UJ70 344 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 V9GYV3 84 aa6.5□□□□□ -1.37
TDP1-208ENST00000553989 IGHV3OR16-13A0A075B7E8 117 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 IGHV3-74A0A0B4J1X5 117 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 IGHV7-4-1A0A0J9YVY3 117 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 SMIM27A0A1W2PRY6 76 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 K7EIM0 57 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 K7EN84 100 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 CHEK1O14757 476 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 DEFB4AO15263 64 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 CA1P00915 261 aaPredicted RBP6.49□□□□□ -1.37
TDP1-208ENST00000553989 HLA-DQA1P01909 254 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 MFAP2P55001 183 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 CENPWQ5EE01 88 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 ZNF600Q6ZNG1 722 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 S100A7AQ86SG5 101 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 ATP6V0BQ99437 205 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 TRGV9Q99603 122 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 PAXXQ9BUH6 204 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 PRO1933Q9H354 126 aa6.49□□□□□ -1.37
TDP1-208ENST00000553989 ZNF705FA8MVS1 300 aaPredicted RBP6.48□□□□□ -1.37
TDP1-208ENST00000553989 M0R143 59 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 GNG7O60262 68 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 ZNF705DP0CH99 300 aaPredicted RBP6.48□□□□□ -1.37
TDP1-208ENST00000553989 ZNF705BP0CI00 300 aaPredicted RBP6.48□□□□□ -1.37
TDP1-208ENST00000553989 RAB4AP20338 218 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 MFAP4P55083 255 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 IBA57Q5T440 356 aaKnown RBP6.48□□□□□ -1.37
TDP1-208ENST00000553989 TMEM256Q8N2U0 113 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 FAM167A-AS1Q96KT0 104 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 C20orf144Q9BQM9 153 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 C11orf68Q9H3H3 251 aaKnown RBP6.48□□□□□ -1.37
TDP1-208ENST00000553989 KLF12Q9Y4X4 402 aa6.48□□□□□ -1.37
TDP1-208ENST00000553989 IGKV1OR2-108A0A075B7D4 117 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 PGPEP1LA6NFU8 196 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 SNURFLB1AK76 121 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 IGLL5B9A064 214 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 SLC17A3O00476 420 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 HYPMO75409 117 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 IGHV3-48P01763 117 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 APCSP02743 223 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 GPX1P07203 203 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 CTSGP08311 255 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 HIST1H1EP10412 219 aaKnown RBP6.47□□□□□ -1.37
TDP1-208ENST00000553989 PLP1P60201 277 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 UBE2L3P68036 154 aaKnown RBP6.47□□□□□ -1.37
TDP1-208ENST00000553989 TMEM183BQ1AE95 376 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 LEMD1Q68G75 181 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 TCF24Q7RTU0 167 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 OR8I2Q8N0Y5 310 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 NPIPB3Q92617 1050 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 ZNF503Q96F45 646 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 SLC25A2Q9BXI2 301 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 SAMD10Q9BYL1 202 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 ZNF586Q9NXT0 402 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 NAT8BQ9UHF3 227 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 EPDR1Q9UM22 224 aa6.47□□□□□ -1.37
TDP1-208ENST00000553989 IGHV3-66A0A0C4DH42 116 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 FAM231BA6NCW3 169 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 PEX7O00628 323 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 ZNF253O75346 499 aa6.46□□□□□ -1.38
TDP1-208ENST00000553989 IGLV2-8P01709 118 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms