RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ORMDL1Q9P0S3 153 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 KLK9Q9UKQ9 250 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 ZFP30Q9Y2G7 519 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 DOCK4Q8N1I0 1966 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 NUP210Q8TEM1 1887 aaPredicted RBP1.13□□□□□ -2.23
SRP54-204ENST00000553923 KDM6AO15550 1401 aaPredicted RBP1.13□□□□□ -2.23
SRP54-204ENST00000553923 PIK3C2AO00443 1686 aa1.13□□□□□ -2.23
SRP54-204ENST00000553923 SLX4Q8IY92 1834 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 TMEM2Q9UHN6 1383 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 A0A087WSZ3 146 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 TRBV6-5A0A0K0K1A5 114 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 TMEM218A2RU14 115 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 A6NN06 94 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 KLF7O75840 302 aaPredicted RBP1.12□□□□□ -2.23
SRP54-204ENST00000553923 PIPP12273 146 aaPredicted RBP1.12□□□□□ -2.23
SRP54-204ENST00000553923 ADCYAP1P18509 176 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 POLR2JP52435 117 aaKnown RBP1.12□□□□□ -2.23
SRP54-204ENST00000553923 CATR1Q13166 79 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 ASB16-AS1Q495Z4 193 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 S100A7L2Q5SY68 101 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 C9orf153Q5TBE3 101 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 OR2T2Q6IF00 324 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 ZNF833PQ6ZTB9 187 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 SLC25A26Q70HW3 274 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 COA5Q86WW8 74 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 SVBPQ8N300 66 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 SNRNP25Q9BV90 132 aaKnown RBP1.12□□□□□ -2.23
SRP54-204ENST00000553923 REG4Q9BYZ8 158 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 TMEM242Q9NWH2 141 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 COA4Q9NYJ1 87 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 CHCHD2Q9Y6H1 151 aaPredicted RBP1.12□□□□□ -2.23
SRP54-204ENST00000553923 XIRP1Q702N8 1843 aaKnown RBP1.12□□□□□ -2.23
SRP54-204ENST00000553923 GLI3P10071 1580 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 OBSL1O75147 1896 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 NUP210LQ5VU65 1888 aa1.12□□□□□ -2.23
SRP54-204ENST00000553923 MYO5AQ9Y4I1 1855 aaKnown RBP1.12□□□□□ -2.23
SRP54-204ENST00000553923 DENND4CQ5VZ89 1909 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 NISCHQ9Y2I1 1504 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 ZNF407Q9C0G0 2248 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 NUP98P52948 1817 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 TAF1LQ8IZX4 1826 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 TRAV23DV6A0A075B6W5 121 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 A0A1W2PRS3 328 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 MCRIP1C9JLW8 97 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 J3QRE1 110 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 APOC4-APOC2K7ER74 178 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 IFNA17P01571 189 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 IGKCP01834 107 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 APOC2P02655 101 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 S100A8P05109 93 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 PIRTP0C851 137 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 COX7CP15954 63 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 CNBPP62633 177 aaKnown RBP1.11□□□□□ -2.23
SRP54-204ENST00000553923 Q56UQ5 140 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 OR10AG1Q8NH19 301 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 VSTM2AQ8TAG5 236 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 DYNLRB2Q8TF09 96 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 LINC00052Q96N35 136 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 MBD5Q9P267 1494 aa1.11□□□□□ -2.23
SRP54-204ENST00000553923 KTN1Q86UP2 1357 aaKnown RBP1.1□□□□□ -2.23
SRP54-204ENST00000553923 CCNB3Q8WWL7 1395 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 MGAMO43451 1857 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 NYNRINQ9P2P1 1898 aaKnown RBP1.1□□□□□ -2.23
SRP54-204ENST00000553923 TMEM30CPA0ZSE6 113 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 GEMIN2O14893 280 aaKnown RBP1.1□□□□□ -2.23
SRP54-204ENST00000553923 CCL16O15467 120 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 PITX3O75364 302 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 NDUFB6O95139 128 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 S100A10P60903 97 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 C10orf55Q5SWW7 151 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 SPANXN1Q5VSR9 72 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 C8orf59Q8N0T1 100 aaPredicted RBP1.1□□□□□ -2.23
SRP54-204ENST00000553923 Q8N2B8 174 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 C10orf105Q8TEF2 133 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 MRPL57Q9BQC6 102 aaKnown RBP1.1□□□□□ -2.23
SRP54-204ENST00000553923 WFDC10AQ9H1F0 79 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 SERP1Q9Y6X1 66 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
SRP54-204ENST00000553923 PTPRSQ13332 1948 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 TRPM1Q7Z4N2 1603 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 ZNF518AQ6AHZ1 1483 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 ADGRB3O60242 1522 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 FAM135AQ9P2D6 1515 aa1.1□□□□□ -2.23
SRP54-204ENST00000553923 FER1L6Q2WGJ9 1857 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 EIF4G3O43432 1585 aaKnown RBP1.09□□□□□ -2.23
SRP54-204ENST00000553923 GREB1Q4ZG55 1949 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 MYOM3Q5VTT5 1437 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 MYH11P35749 1972 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 TRGV2A0A075B6R0 118 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 TCRBV3S1A0A5B6 114 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 M0R143 59 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 PPYP01298 95 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 SPINK8P0C7L1 97 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 IFITM1P13164 125 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 NPC2P61916 151 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 RBM3P98179 157 aaKnown RBP1.09□□□□□ -2.23
SRP54-204ENST00000553923 HSD52Q0P140 79 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 RHOHQ15669 191 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 NCMAPQ5T1S8 102 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 CSAG1Q6PB30 78 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms