RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 PPP1R17O96001 155 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 ORM1P02763 201 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 SMIM13P0DJ93 91 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 TMEM11P17152 192 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 LEPP41159 167 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 NMUP48645 174 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 DLX1P56177 255 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 HES1Q14469 280 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 LAGE3Q14657 143 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 RNF151Q2KHN1 245 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 ORMDL2Q53FV1 153 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 PRR31Q5SQ13 230 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 FOXI2Q6ZQN5 318 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 PCP2Q8IVA1 136 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 FAM223AQ8IWN6 122 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 CEND1Q8N111 149 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 EEF1AKMT3Q96AZ1 226 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 C20orf78Q9BR46 151 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 SPCS1Q9Y6A9 102 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 FAM208BQ5VWN6 2430 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 DCHS1Q96JQ0 3298 aa4.04□□□□□ -1.76
TMEM55B-204ENST00000553602 DMXL1Q9Y485 3027 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 TMSB15BA0A087X1C1 80 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 IGKV3D-20A0A0C4DH25 116 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 E9PLD3 99 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 F8VRH5 84 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 F8W1H4 67 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 LYNX1G3V0Z9 82 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 SMKR1H3BMG3 65 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 NXPH4O95158 308 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 LYNX1P0DP58 116 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 UBE2E1P51965 193 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 KLRD1Q13241 179 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 FOXE3Q13461 319 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 C15orf32Q32M92 178 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 C19orf54Q5BKX5 351 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 TMEM78Q5T7P6 136 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 SAMD13Q5VXD3 122 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 ERASQ7Z444 233 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 APRG1Q8IVJ8 170 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 SVIPQ8NHG7 77 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 MYOZ3Q8TDC0 251 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 ITLN2Q8WWU7 325 aaPredicted RBP4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 TMEM158Q8WZ71 300 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 METTL26Q96S19 204 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 SMIM2Q9BVW6 85 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 MEGF9Q9H1U4 602 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 DKK2Q9UBU2 259 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 HILPDAQ9Y5L2 63 aa4.03□□□□□ -1.76
TMEM55B-204ENST00000553602 IGKV2D-26A0A0A0MRZ7 120 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 TRAV8-2A0A0B4J237 113 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 IGHV1-69DA0A0B4J2H0 117 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 TMEM8BA6NDV4 472 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 NCBP2LA6PVI3 153 aaKnown RBP4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 H3BUA1 57 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 H7C1H1 209 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 J3QR89 54 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 OVOL1O14753 267 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 PRSS1P07477 247 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 GCSHP23434 173 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 UQCRFS1P47985 274 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 FXYD2P54710 66 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 UCNP55089 124 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 ZC2HC1BQ5TFG8 222 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 LCNL1Q6ZST4 164 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 ZGRF1Q86YA3 2104 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 GLMPQ8WWB7 406 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 TOMM6Q96B49 74 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 AJUBAQ96IF1 538 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 LINC00477Q96M19 166 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 FOXC2Q99958 501 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 AGPAT4-IT1Q9H0P7 198 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 MSRB1Q9NZV6 116 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 SH3BGRL2Q9UJC5 107 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 ZNF580Q9UK33 172 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 TIMM8BQ9Y5J9 83 aaPredicted RBP4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 NCOR2Q9Y618 2525 aa4.02□□□□□ -1.77
TMEM55B-204ENST00000553602 PLXNB1O43157 2135 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 WDFY3Q8IZQ1 3526 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 TRBV7-3A0A075B6L6 115 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 TRAV21A0A0B4J279 112 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 OR11H12B2RN74 326 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 PRAC2D3DTV9 90 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 ATP6V0E1O15342 81 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 SAP30O75446 220 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 CLEC3BP05452 202 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 HLA-DMBP28068 263 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 PRR30Q53SZ7 412 aaPredicted RBP4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 PAPPA-AS1Q5QFB9 102 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 LYRM7Q5U5X0 104 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 C5orf56Q8N8D9 126 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 OR11H1Q8NG94 326 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 OR11H2Q8NH07 326 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 ATP6V0E2Q8NHE4 81 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 LINC01560Q8TB33 94 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 FAM19A4Q96LR4 140 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 C18orf15Q96N68 181 aa4.01□□□□□ -1.77
TMEM55B-204ENST00000553602 DPH3P1Q9H4G8 78 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms