RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 ERCC8Q13216 396 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 ICAM4Q14773 271 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 RPL7L1Q6DKI1 246 aaKnown RBP8.24□□□□□ -1.09
SRP54-203ENST00000553544 Q6ZNX1 250 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 C9orf47Q6ZRZ4 202 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 TCTE3Q8IZS6 198 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 ARL6IP6Q8N6S5 226 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 LINC00612Q8N6U2 182 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 CMTM2Q8TAZ6 248 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 ZNF503Q96F45 646 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 LINC00477Q96M19 166 aa8.24□□□□□ -1.09
SRP54-203ENST00000553544 TRAV12-3A0A0B4J271 114 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 F5H768 121 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 G3V3Q6 166 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 BCL2L11O43521 198 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 CXorf1O96002 111 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 SLC25A5P05141 298 aaKnown RBP8.23□□□□□ -1.09
SRP54-203ENST00000553544 STAG3L2P0CL84 134 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 STAG3L3P0CL85 134 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 CRISP2P16562 243 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 TMEM78Q5T7P6 136 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 EIF5AL1Q6IS14 154 aaKnown RBP8.23□□□□□ -1.09
SRP54-203ENST00000553544 AKAP14Q86UN6 197 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 HYLS1Q96M11 299 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 Q9H8V8 135 aa8.23□□□□□ -1.09
SRP54-203ENST00000553544 NOP10Q9NPE3 64 aaKnown RBP8.23□□□□□ -1.09
SRP54-203ENST00000553544 TRBV7-9A0A0J9YWB2 115 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 CTXND1A0A1B0GTU2 59 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 SERTM2A0A1B0GWG4 89 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 UMAD1C9J7I0 102 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 J3KRW8 73 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 K7EQM0 130 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 ZNF324O75467 553 aaPredicted RBP8.22□□□□□ -1.09
SRP54-203ENST00000553544 ATP5G1P05496 136 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 NMBP08949 121 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 TPT1P13693 172 aaKnown RBP8.22□□□□□ -1.09
SRP54-203ENST00000553544 ATP5G3P48201 142 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 STOML3Q8TAV4 291 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 PHYHIPLQ96FC7 376 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 VGLL1Q99990 258 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 LINC00467Q9BRT7 94 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 ZNF471Q9BX82 626 aaPredicted RBP8.22□□□□□ -1.09
SRP54-203ENST00000553544 Q9H3A6 140 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 OTORQ9NRC9 128 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 LINC00588Q9Y4M8 146 aa8.22□□□□□ -1.09
SRP54-203ENST00000553544 IGKV2-40A0A087WW87 121 aaPredicted RBP8.21□□□□□ -1.1
SRP54-203ENST00000553544 C7orf71A4D174 169 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 RBAKDNA6NC62 111 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 SMLR1H3BR10 107 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 IGKV2D-40P01614 121 aaPredicted RBP8.21□□□□□ -1.1
SRP54-203ENST00000553544 SEC11BP0C7V7 166 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 ARL14EPLP0DKL9 152 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 BTF3P20290 206 aaKnown RBP8.21□□□□□ -1.1
SRP54-203ENST00000553544 RANP62826 216 aaKnown RBP8.21□□□□□ -1.1
SRP54-203ENST00000553544 CD300CQ08708 224 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 CCDC28AQ8IWP9 274 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 ZFAND2AQ8N6M9 145 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 RAB24Q969Q5 203 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 NKX6-2Q9C056 277 aaPredicted RBP8.21□□□□□ -1.1
SRP54-203ENST00000553544 SH3BGRL3Q9H299 93 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 ZNF492Q9P255 531 aa8.21□□□□□ -1.1
SRP54-203ENST00000553544 FBLL1A6NHQ2 334 aaKnown RBP8.2□□□□□ -1.1
SRP54-203ENST00000553544 C1QBP02746 253 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 DAZ2Q13117 558 aaKnown RBP8.2□□□□□ -1.1
SRP54-203ENST00000553544 BTN1A1Q13410 526 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 TTC32Q5I0X7 151 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 DPPA3Q6W0C5 159 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 SSX7Q7RTT5 188 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 IQCF2Q8IXL9 164 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 C11orf72Q8NBR9 251 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 LENEPQ9Y5L5 61 aa8.2□□□□□ -1.1
SRP54-203ENST00000553544 SNURFLB1AK76 121 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 TEX46H3BTG2 121 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 GPX1P07203 203 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 GCHFRP30047 84 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 ANXA2RQ3ZCQ2 193 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 PRR9Q5T870 116 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 C5orf17Q8NAS9 161 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 TMED6Q8WW62 240 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 ST6GAL2Q96JF0 529 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 CYTL1Q9NRR1 136 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
SRP54-203ENST00000553544 PGPA6NDG6 321 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 EIF3GO75821 320 aaKnown RBP eCLIP8.18□□□□□ -1.1
SRP54-203ENST00000553544 RNASE4P34096 147 aaKnown RBP8.18□□□□□ -1.1
SRP54-203ENST00000553544 PPT1P50897 306 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 RAB5CP51148 216 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 ZNF138P52744 262 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 Q6ZQT7 251 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 TMUB2Q71RG4 321 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 EIF4E3Q8N5X7 224 aaKnown RBP8.18□□□□□ -1.1
SRP54-203ENST00000553544 OR11H4Q8NGC9 324 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 TCEAL7Q9BRU2 100 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 NDFIP1Q9BT67 221 aa8.18□□□□□ -1.1
SRP54-203ENST00000553544 A0A1W2PRE2 83 aa8.17□□□□□ -1.1
SRP54-203ENST00000553544 GAGE12BA1L429 117 aa8.17□□□□□ -1.1
SRP54-203ENST00000553544 MAP1LC3B2A6NCE7 125 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms