RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 POM121L12Q8N7R1 296 aa10.83□□□□□ -0.68
SHMT2-204ENST00000553324 C5orf17Q8NAS9 161 aa10.83□□□□□ -0.68
SHMT2-204ENST00000553324 Q8TAT8 98 aa10.83□□□□□ -0.68
SHMT2-204ENST00000553324 ARPC5LQ9BPX5 153 aa10.83□□□□□ -0.68
SHMT2-204ENST00000553324 CYTL1Q9NRR1 136 aa10.83□□□□□ -0.68
SHMT2-204ENST00000553324 RPH3ALQ9UNE2 315 aa10.83□□□□□ -0.68
SHMT2-204ENST00000553324 SMLR1H3BR10 107 aa10.82□□□□□ -0.68
SHMT2-204ENST00000553324 Q6AWC8 147 aa10.82□□□□□ -0.68
SHMT2-204ENST00000553324 NKX6-2Q9C056 277 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-204ENST00000553324 GSN-AS1Q9NRJ2 163 aa10.82□□□□□ -0.68
SHMT2-204ENST00000553324 A0A1W2PRE2 83 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 FBLL1A6NHQ2 334 aaKnown RBP10.81□□□□□ -0.68
SHMT2-204ENST00000553324 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
SHMT2-204ENST00000553324 EIF5AP63241 154 aaKnown RBP10.81□□□□□ -0.68
SHMT2-204ENST00000553324 RNF212Q495C1 297 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 PRR9Q5T870 116 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 FAM159AQ6UWV7 190 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 IQCF2Q8IXL9 164 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 C11orf72Q8NBR9 251 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 C18orf15Q96N68 181 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 NDFIP1Q9BT67 221 aa10.81□□□□□ -0.68
SHMT2-204ENST00000553324 KANTRA0A1W2PQU2 76 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 GAGE12BA1L429 117 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 GAGE7O76087 117 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 TCRAP04437 139 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 TCL1AP56279 114 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 LGALS9BQ3B8N2 356 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 STOML3Q8TAV4 291 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 TREM1Q9NP99 234 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 EPDR1Q9UM22 224 aa10.8□□□□□ -0.68
SHMT2-204ENST00000553324 TRGV2A0A075B6R0 118 aa10.79□□□□□ -0.68
SHMT2-204ENST00000553324 TRAV21A0A0B4J279 112 aa10.79□□□□□ -0.68
SHMT2-204ENST00000553324 SEC11BP0C7V7 166 aa10.79□□□□□ -0.68
SHMT2-204ENST00000553324 OR5I1Q13606 314 aa10.79□□□□□ -0.68
SHMT2-204ENST00000553324 UBE2DNLQ8IWF7 75 aa10.79□□□□□ -0.68
SHMT2-204ENST00000553324 TRGV11A0A075B6L2 103 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 TRGV1A0A0A0MS02 117 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 UMAD1C9J7I0 102 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 SPINK4O60575 86 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 FAM3BP58499 235 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-204ENST00000553324 GNG5P63218 68 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 ZNF415Q09FC8 603 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 ZNF726P1Q15940 193 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 OR11H4Q8NGC9 324 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 KLF12Q9Y4X4 402 aa10.78□□□□□ -0.68
SHMT2-204ENST00000553324 TRAV8-1A0A0A6YYK1 113 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 GGTLC3B5MD39 225 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 BCL2L11O43521 198 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 TDRG1Q3Y452 100 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 SAPCD1Q5SSQ6 148 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 Q6ZTI0 123 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 SSX7Q7RTT5 188 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 CYB561D1Q8N8Q1 229 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 ATG101Q9BSB4 218 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 ZNF471Q9BX82 626 aaPredicted RBP10.77□□□□□ -0.69
SHMT2-204ENST00000553324 TP53TG3Q9ULZ0 132 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 DNAH6Q9C0G6 4158 aa10.77□□□□□ -0.69
SHMT2-204ENST00000553324 H3BNG1 76 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 NUDT3O95989 172 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 IFNA7P01567 189 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 PPT1P50897 306 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 MUC21Q5SSG8 566 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 Q6ZQT7 251 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 TMEM75Q8N9X5 138 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 HIST1H2BAQ96A08 127 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 KCNS1Q96KK3 526 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 SPXQ9BT56 116 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 PSG8Q9UQ74 426 aa10.76□□□□□ -0.69
SHMT2-204ENST00000553324 MAP1LC3B2A6NCE7 125 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 F6UZH7 168 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 PFDN1O60925 122 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 CCL18P55774 89 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 FLI1Q01543 452 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-204ENST00000553324 SLAQ13239 276 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 ZFP69Q49AA0 526 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 DPPA3Q6W0C5 159 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 TVP23CQ96ET8 276 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 MAP1LC3BQ9GZQ8 125 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 TMPRSS5Q9H3S3 457 aa10.75□□□□□ -0.69
SHMT2-204ENST00000553324 TRAV26-1A0A087WT03 109 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 FAM74A7A6NL05 159 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 TPT1P13693 172 aaKnown RBP10.74□□□□□ -0.69
SHMT2-204ENST00000553324 FGF8P55075 233 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-204ENST00000553324 TMEM183BQ1AE95 376 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 SMUG1Q53HV7 270 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 TMUB2Q71RG4 321 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 TMEM183AQ8IXX5 376 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 TCTE3Q8IZS6 198 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 SGK494Q96LW2 274 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 TCEAL7Q9BRU2 100 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 SDF2L1Q9HCN8 221 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 MDFICQ9P1T7 246 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 NAGKQ9UJ70 344 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 ARL2-SNX15V9GYD0 113 aa10.74□□□□□ -0.69
SHMT2-204ENST00000553324 IGLV2-11P01706 119 aa10.73□□□□□ -0.69
SHMT2-204ENST00000553324 HOXA5P20719 270 aa10.73□□□□□ -0.69
SHMT2-204ENST00000553324 FHITP49789 147 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms