RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 TAAR5O14804 337 aa13.49□□□□□ -0.25
PTCH1-227ENST00000553256 HOXA5P20719 270 aa13.49□□□□□ -0.25
PTCH1-227ENST00000553256 GNG5P63218 68 aa13.49□□□□□ -0.25
PTCH1-227ENST00000553256 IBA57Q5T440 356 aaKnown RBP13.49□□□□□ -0.25
PTCH1-227ENST00000553256 Q6ZTI0 123 aa13.49□□□□□ -0.25
PTCH1-227ENST00000553256 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
PTCH1-227ENST00000553256 HYLS1Q96M11 299 aa13.49□□□□□ -0.25
PTCH1-227ENST00000553256 IGHV1OR15-1A0A075B7D0 117 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 TRAV8-1A0A0A6YYK1 113 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 BORCS7-ASMTA0A0B4J1R7 106 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 GGTLC3B5MD39 225 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 SPINK4O60575 86 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 IGLV2-11P01706 119 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 TCL1AP56279 114 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 ZNF345Q14585 488 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 KCNRGQ8N5I3 272 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 KLF12Q9Y4X4 402 aa13.48□□□□□ -0.25
PTCH1-227ENST00000553256 HMSDA8MTL9 139 aa13.47□□□□□ -0.25
PTCH1-227ENST00000553256 GOLT1AQ6ZVE7 132 aa13.47□□□□□ -0.25
PTCH1-227ENST00000553256 C15orf53Q8NAA6 179 aa13.47□□□□□ -0.25
PTCH1-227ENST00000553256 ACTR3CQ9C0K3 210 aaPredicted RBP13.47□□□□□ -0.25
PTCH1-227ENST00000553256 DYNC1H1Q14204 4646 aaKnown RBP13.47□□□□□ -0.25
PTCH1-227ENST00000553256 PKD1P98161 4303 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 GAGE12BA1L429 117 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 SNURFLB1AK76 121 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 F5H768 121 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 GAGE7O76087 117 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 CXorf1O96002 111 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 TCRAP04437 139 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 GAGE12FP0CL80 117 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 GAGE12GP0CL81 117 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 GAGE12IP0CL82 117 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 TDRG1Q3Y452 100 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 RNF212Q495C1 297 aa13.46□□□□□ -0.25
PTCH1-227ENST00000553256 DNAH11Q96DT5 4516 aa13.46□□□□□ -0.26
PTCH1-227ENST00000553256 NACAE9PAV3 2078 aa13.46□□□□□ -0.26
PTCH1-227ENST00000553256 CTXND1A0A1B0GTU2 59 aa13.45□□□□□ -0.26
PTCH1-227ENST00000553256 FAM74A1Q5RGS3 127 aa13.45□□□□□ -0.26
PTCH1-227ENST00000553256 C5orf17Q8NAS9 161 aa13.45□□□□□ -0.26
PTCH1-227ENST00000553256 CMTM2Q8TAZ6 248 aa13.45□□□□□ -0.26
PTCH1-227ENST00000553256 TMEM167BQ9NRX6 74 aa13.45□□□□□ -0.26
PTCH1-227ENST00000553256 PKHD1P08F94 4074 aa13.44□□□□□ -0.26
PTCH1-227ENST00000553256 Q6ZR54 194 aa13.44□□□□□ -0.26
PTCH1-227ENST00000553256 TMPRSS5Q9H3S3 457 aa13.44□□□□□ -0.26
PTCH1-227ENST00000553256 SERTM2A0A1B0GWG4 89 aa13.43□□□□□ -0.26
PTCH1-227ENST00000553256 A0A1W2PRE2 83 aa13.43□□□□□ -0.26
PTCH1-227ENST00000553256 RGS13O14921 159 aa13.43□□□□□ -0.26
PTCH1-227ENST00000553256 MUC4Q99102 2169 aa13.43□□□□□ -0.26
PTCH1-227ENST00000553256 MDFICQ9P1T7 246 aa13.43□□□□□ -0.26
PTCH1-227ENST00000553256 EPDR1Q9UM22 224 aa13.43□□□□□ -0.26
PTCH1-227ENST00000553256 SUMO1P63165 101 aaKnown RBP13.42□□□□□ -0.26
PTCH1-227ENST00000553256 LGALS9BQ3B8N2 356 aa13.42□□□□□ -0.26
PTCH1-227ENST00000553256 VSIG2Q96IQ7 327 aa13.42□□□□□ -0.26
PTCH1-227ENST00000553256 RPH3ALQ9UNE2 315 aa13.42□□□□□ -0.26
PTCH1-227ENST00000553256 H3BNG1 76 aa13.41□□□□□ -0.26
PTCH1-227ENST00000553256 ZNF80P51504 273 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-227ENST00000553256 MUC21Q5SSG8 566 aa13.41□□□□□ -0.26
PTCH1-227ENST00000553256 SGK494Q96LW2 274 aa13.41□□□□□ -0.26
PTCH1-227ENST00000553256 ARPC5LQ9BPX5 153 aa13.41□□□□□ -0.26
PTCH1-227ENST00000553256 C11orf21Q9P2W6 132 aa13.41□□□□□ -0.26
PTCH1-227ENST00000553256 TRAV26-1A0A087WT03 109 aa13.4□□□□□ -0.26
PTCH1-227ENST00000553256 FHITP49789 147 aa13.4□□□□□ -0.26
PTCH1-227ENST00000553256 TREM1Q9NP99 234 aa13.4□□□□□ -0.26
PTCH1-227ENST00000553256 HERC2O95714 4834 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 TRGV1A0A0A0MS02 117 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 FAM74A7A6NL05 159 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 F6UZH7 168 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 FGF8P55075 233 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-227ENST00000553256 FAM3BP58499 235 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-227ENST00000553256 AKR1C8PQ5T2L2 129 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 Q6ZNX1 250 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 TMEM75Q8N9X5 138 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 ZNRF2Q8NHG8 242 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 PSG8Q9UQ74 426 aa13.39□□□□□ -0.27
PTCH1-227ENST00000553256 IGHV3-16A0A0C4DH30 117 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 A0A0D9SG52 128 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 RTL8CO15255 209 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 BCL2L11O43521 198 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 SEC11BP0C7V7 166 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 CYB561D1Q8N8Q1 229 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 RASL10AQ92737 203 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 LINC00479Q96M42 142 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 C8orf49Q96NF6 230 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 ATG101Q9BSB4 218 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 MRPL16Q9NX20 251 aaKnown RBP13.38□□□□□ -0.27
PTCH1-227ENST00000553256 LINC00588Q9Y4M8 146 aa13.38□□□□□ -0.27
PTCH1-227ENST00000553256 TRAV21A0A0B4J279 112 aa13.37□□□□□ -0.27
PTCH1-227ENST00000553256 MAP1LC3B2A6NCE7 125 aa13.37□□□□□ -0.27
PTCH1-227ENST00000553256 GNRH2O43555 120 aa13.37□□□□□ -0.27
PTCH1-227ENST00000553256 ZNF415Q09FC8 603 aa13.37□□□□□ -0.27
PTCH1-227ENST00000553256 OR5I1Q13606 314 aa13.37□□□□□ -0.27
PTCH1-227ENST00000553256 MBD3L1Q8WWY6 194 aa13.37□□□□□ -0.27
PTCH1-227ENST00000553256 MAP1LC3BQ9GZQ8 125 aa13.37□□□□□ -0.27
PTCH1-227ENST00000553256 NUDT3O95989 172 aa13.36□□□□□ -0.27
PTCH1-227ENST00000553256 TYMSP04818 313 aa13.36□□□□□ -0.27
PTCH1-227ENST00000553256 FLI1Q01543 452 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-227ENST00000553256 FHL2Q14192 279 aa13.36□□□□□ -0.27
PTCH1-227ENST00000553256 TMEM183BQ1AE95 376 aa13.36□□□□□ -0.27
PTCH1-227ENST00000553256 FAM159AQ6UWV7 190 aa13.36□□□□□ -0.27
PTCH1-227ENST00000553256 TMEM183AQ8IXX5 376 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms