RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 FAM74A7A6NL05 159 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 RAB5CP51148 216 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 EMP1P54849 157 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 PRR9Q5T870 116 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 FAM222AQ5U5X8 452 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 Q6ZTC4 211 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 CYB561D1Q8N8Q1 229 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 MBD3L1Q8WWY6 194 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 LINC00467Q9BRT7 94 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 TCEAL7Q9BRU2 100 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 ATG101Q9BSB4 218 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 TMPRSS5Q9H3S3 457 aa8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 KLK5Q9Y337 293 aaPredicted RBP8.38□□□□□ -1.07
TRAFD1-209ENST00000552896 SACSQ9NZJ4 4579 aa8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 FBLL1A6NHQ2 334 aaKnown RBP8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 LYRM9A8MSI8 78 aa8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 ZNF324O75467 553 aaPredicted RBP8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 RNASE4P34096 147 aaKnown RBP8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 UBE2G2P60604 165 aa8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 SUMO1P63165 101 aaKnown RBP8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 C12orf74Q32Q52 190 aa8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 TMEM75Q8N9X5 138 aa8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 EPDR1Q9UM22 224 aa8.37□□□□□ -1.07
TRAFD1-209ENST00000552896 TRAV8-1A0A0A6YYK1 113 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 TRAV10A0A0B4J240 114 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 PRM2P04554 102 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 H2AFB1P0C5Y9 115 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 AZU1P20160 251 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 Q6AWC8 147 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 CCDC28AQ8IWP9 274 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 ZNF680Q8NEM1 530 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 SFT2D1Q8WV19 159 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 NDFIP1Q9BT67 221 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 RYR2Q92736 4967 aa8.36□□□□□ -1.07
TRAFD1-209ENST00000552896 PEX7O00628 323 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 IFNA7P01567 189 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 IGLV2-11P01706 119 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 HTN1P15515 57 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 SULT1A2P50226 295 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 PPT1P50897 306 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 ANXA2RQ3ZCQ2 193 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 EIF4E3Q8N5X7 224 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 HIST1H2BAQ96A08 127 aa8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 TIMM8BQ9Y5J9 83 aaPredicted RBP8.35□□□□□ -1.07
TRAFD1-209ENST00000552896 TRAV1-1A0A0B4J248 108 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 RGS13O14921 159 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 DAD1P61803 113 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 FLI1Q01543 452 aaPredicted RBP8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 ZNF767PQ75MW2 155 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 Q86TA4 180 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 C2CD4CQ8TF44 421 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 TREM1Q9NP99 234 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 RYR3Q15413 4870 aa8.34□□□□□ -1.07
TRAFD1-209ENST00000552896 IGHV1OR15-1A0A075B7D0 117 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 DEFB131BA0A096LNP1 70 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 LOC100996750A0A140TA64 210 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 LCE6AA0A183 80 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 A0A1B0GV50 99 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 CBY3A6NI87 242 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 SNURFLB1AK76 121 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 F6UZH7 168 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 TEX46H3BTG2 121 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 PAGE4O60829 102 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 ATP5G3P48201 142 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 TCTAP57738 103 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 IBA57Q5T440 356 aaKnown RBP8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 CST9LP1Q5W188 147 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 C11orf72Q8NBR9 251 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 TVP23CQ96ET8 276 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 KRTAP4-6Q9BYQ5 205 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 MANBALQ9NQG1 85 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 PSG8Q9UQ74 426 aa8.33□□□□□ -1.08
TRAFD1-209ENST00000552896 MUC4Q99102 2169 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 NKX2-5P52952 324 aaPredicted RBP8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 TCL1AP56279 114 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 DAZ2Q13117 558 aaKnown RBP8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 TDRG1Q3Y452 100 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 Q6ZQT7 251 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 LINC00612Q8N6U2 182 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 FMC1Q96HJ9 113 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 SGK494Q96LW2 274 aa8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 NOP10Q9NPE3 64 aaKnown RBP8.32□□□□□ -1.08
TRAFD1-209ENST00000552896 ZNF415Q09FC8 603 aa8.31□□□□□ -1.08
TRAFD1-209ENST00000552896 SAPCD1Q5SSQ6 148 aa8.31□□□□□ -1.08
TRAFD1-209ENST00000552896 PRNTQ86SH4 94 aa8.31□□□□□ -1.08
TRAFD1-209ENST00000552896 C8orf49Q96NF6 230 aa8.31□□□□□ -1.08
TRAFD1-209ENST00000552896 PGPEP1Q9NXJ5 209 aa8.31□□□□□ -1.08
TRAFD1-209ENST00000552896 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
TRAFD1-209ENST00000552896 HYDINQ4G0P3 5121 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 TRGV11A0A075B6L2 103 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 IGHV4-4A0A075B6R2 117 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 TRAV34A0A0B4J273 112 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 TRBV6-1A0A0K0K1D8 114 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 GCGP01275 180 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 PFN1P07737 140 aaKnown RBP8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 DEFB130BP0DP73 79 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 DEFB130AP0DP74 79 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 AKR1C3P42330 323 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms