RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 Q9H3A6 140 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 DKK2Q9UBU2 259 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 TIMM8BQ9Y5J9 83 aaPredicted RBP4.23□□□□□ -1.73
CCDC65-204ENST00000552188 TENM2Q9NT68 2774 aa4.23□□□□□ -1.73
CCDC65-204ENST00000552188 C7orf71A4D174 169 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 TAAR5O14804 337 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 ARPC5O15511 151 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 EIF3GO75821 320 aaKnown RBP eCLIP4.22□□□□□ -1.73
CCDC65-204ENST00000552188 NDUFB4O95168 129 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 STAG3L3P0CL85 134 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 AZU1P20160 251 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 RNASE4P34096 147 aaKnown RBP4.22□□□□□ -1.73
CCDC65-204ENST00000552188 ZNF138P52744 262 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 Q5BKY6 102 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 GFI1BQ5VTD9 330 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 RPL7L1Q6DKI1 246 aaKnown RBP4.22□□□□□ -1.73
CCDC65-204ENST00000552188 LGALS9CQ6DKI2 356 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 C9orf47Q6ZRZ4 202 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 UBE2DNLQ8IWF7 75 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 OR2G3Q8NGZ4 309 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 TMEM263Q8WUH6 116 aaKnown RBP4.22□□□□□ -1.73
CCDC65-204ENST00000552188 PHYHIPLQ96FC7 376 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 PYGO2Q9BRQ0 406 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 ACTR3CQ9C0K3 210 aaPredicted RBP4.22□□□□□ -1.73
CCDC65-204ENST00000552188 AGPAT4-IT1Q9H0P7 198 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 TNFSF18Q9UNG2 199 aa4.22□□□□□ -1.73
CCDC65-204ENST00000552188 DYNC2H1Q8NCM8 4307 aaKnown RBP4.21□□□□□ -1.74
CCDC65-204ENST00000552188 CBY3A6NI87 242 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 F5H768 121 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 K7EQM0 130 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 CXorf1O96002 111 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 PRM2P04554 102 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 ATP5G1P05496 136 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 ARL14EPLP0DKL9 152 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 P0DMU3 169 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 FAM231AP0DMU4 169 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 FAM231CP0DMU5 169 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 ATP5G3P48201 142 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 AKR1C8PQ5T2L2 129 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 EIF4E3Q8N5X7 224 aaKnown RBP4.21□□□□□ -1.74
CCDC65-204ENST00000552188 ZNF680Q8NEM1 530 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 NUDT10Q8NFP7 164 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 OCC1Q8TAD7 63 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 NUDT11Q96G61 164 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 FAM210BQ96KR6 192 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 VGLL1Q99990 258 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 NDFIP1Q9BT67 221 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 NOP10Q9NPE3 64 aaKnown RBP4.21□□□□□ -1.74
CCDC65-204ENST00000552188 OTORQ9NRC9 128 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 TMEM167BQ9NRX6 74 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 ZNF492Q9P255 531 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 APLNQ9ULZ1 77 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 STARD9Q9P2P6 4700 aa4.21□□□□□ -1.74
CCDC65-204ENST00000552188 A0A0D9SG52 128 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 KANTRA0A1W2PQU2 76 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 GAGE12BA1L429 117 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 RBAKDNA6NC62 111 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 RNF222A6NCQ9 220 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 DIRC3C9JPN6 131 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 SMLR1H3BR10 107 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 PFDN1O60925 122 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 GAGE7O76087 117 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 NMBP08949 121 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 GAGE12FP0CL80 117 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 GAGE12GP0CL81 117 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 GAGE12IP0CL82 117 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 STAG3L2P0CL84 134 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 EIF5AP63241 154 aaKnown RBP4.2□□□□□ -1.74
CCDC65-204ENST00000552188 CD300CQ08708 224 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 BTN1A1Q13410 526 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 OR5I1Q13606 314 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 FAM159AQ6UWV7 190 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 GOLT1AQ6ZVE7 132 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 Q8TAT8 98 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 STOML3Q8TAV4 291 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 RNASE8Q8TDE3 154 aaKnown RBP4.2□□□□□ -1.74
CCDC65-204ENST00000552188 ZNF503Q96F45 646 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 LYSTQ99698 3801 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 ATG101Q9BSB4 218 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 SH3BGRL3Q9H299 93 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 LENEPQ9Y5L5 61 aa4.2□□□□□ -1.74
CCDC65-204ENST00000552188 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 IGHV1OR15-1A0A075B7D0 117 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 TRBV7-9A0A0J9YWB2 115 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 CTXND1A0A1B0GTU2 59 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 C5orf52A6NGY3 159 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.19□□□□□ -1.74
CCDC65-204ENST00000552188 KLLNB2CW77 178 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 NUDT3O95989 172 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 IFNA7P01567 189 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 CRISP2P16562 243 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 GCHFRP30047 84 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 CAMPP49913 170 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 PPT1P50897 306 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 ZNF415Q09FC8 603 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 ZFP69Q49AA0 526 aa4.19□□□□□ -1.74
CCDC65-204ENST00000552188 TMEM88Q6PEY1 159 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms