RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 SACSQ9NZJ4 4579 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 SERTM2A0A1B0GWG4 89 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 NUPR2A6NF83 97 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 F6UZH7 168 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 H2AFB1P0C5Y9 115 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 ATP5G3P48201 142 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 EIF5AL1Q6IS14 154 aaKnown RBP11.66□□□□□ -0.54
GCN1-209ENST00000551920 TMEM263Q8WUH6 116 aaKnown RBP11.66□□□□□ -0.54
GCN1-209ENST00000551920 C16orf74Q96GX8 76 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 LINC00479Q96M42 142 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 PYGO2Q9BRQ0 406 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 DNAH1Q9P2D7 4330 aa11.66□□□□□ -0.54
GCN1-209ENST00000551920 PEX7O00628 323 aa11.65□□□□□ -0.54
GCN1-209ENST00000551920 SPART-AS1P0CW21 52 aa11.65□□□□□ -0.54
GCN1-209ENST00000551920 RAB5CP51148 216 aa11.65□□□□□ -0.54
GCN1-209ENST00000551920 CCL20P78556 96 aa11.65□□□□□ -0.54
GCN1-209ENST00000551920 ARL2-SNX15V9GYD0 113 aa11.65□□□□□ -0.54
GCN1-209ENST00000551920 ALMS1Q8TCU4 4167 aa11.65□□□□□ -0.54
GCN1-209ENST00000551920 TRAV34A0A0B4J273 112 aa11.64□□□□□ -0.55
GCN1-209ENST00000551920 PAGE4O60829 102 aa11.64□□□□□ -0.55
GCN1-209ENST00000551920 IFNA7P01567 189 aa11.64□□□□□ -0.55
GCN1-209ENST00000551920 Q6AWC8 147 aa11.64□□□□□ -0.55
GCN1-209ENST00000551920 TMEM75Q8N9X5 138 aa11.64□□□□□ -0.55
GCN1-209ENST00000551920 LINC00467Q9BRT7 94 aa11.64□□□□□ -0.55
GCN1-209ENST00000551920 PSG8Q9UQ74 426 aa11.64□□□□□ -0.55
GCN1-209ENST00000551920 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
GCN1-209ENST00000551920 CST9LP1Q5W188 147 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 ALKAL2Q6UX46 152 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 ZNF493Q6ZR52 646 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 C11orf72Q8NBR9 251 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 C8orf49Q96NF6 230 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 LYSTQ99698 3801 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 NKX6-2Q9C056 277 aaPredicted RBP11.63□□□□□ -0.55
GCN1-209ENST00000551920 TREM1Q9NP99 234 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 TP53TG3Q9ULZ0 132 aa11.63□□□□□ -0.55
GCN1-209ENST00000551920 TEX48A0A1B0GUV7 120 aa11.62□□□□□ -0.55
GCN1-209ENST00000551920 K7EQM0 130 aa11.62□□□□□ -0.55
GCN1-209ENST00000551920 MUC21Q5SSG8 566 aa11.62□□□□□ -0.55
GCN1-209ENST00000551920 PRNTQ86SH4 94 aa11.62□□□□□ -0.55
GCN1-209ENST00000551920 Q86TA4 180 aa11.62□□□□□ -0.55
GCN1-209ENST00000551920 NOP10Q9NPE3 64 aaKnown RBP11.62□□□□□ -0.55
GCN1-209ENST00000551920 IGHV1OR15-1A0A075B7D0 117 aa11.61□□□□□ -0.55
GCN1-209ENST00000551920 TRAV10A0A0B4J240 114 aa11.61□□□□□ -0.55
GCN1-209ENST00000551920 LYRM9A8MSI8 78 aa11.61□□□□□ -0.55
GCN1-209ENST00000551920 ZNF80P51504 273 aaPredicted RBP11.61□□□□□ -0.55
GCN1-209ENST00000551920 ANXA2RQ3ZCQ2 193 aa11.61□□□□□ -0.55
GCN1-209ENST00000551920 EIF4E3Q8N5X7 224 aaKnown RBP11.61□□□□□ -0.55
GCN1-209ENST00000551920 HIST1H2BAQ96A08 127 aa11.61□□□□□ -0.55
GCN1-209ENST00000551920 RYR3Q15413 4870 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 SCO2A0A1W2PP80 73 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 CBY3A6NI87 242 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 C11orf94C9JXX5 98 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 RGS13O14921 159 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 TCEAL7Q9BRU2 100 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 GSN-AS1Q9NRJ2 163 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 GNG13Q9P2W3 67 aa11.6□□□□□ -0.55
GCN1-209ENST00000551920 TIMM8BQ9Y5J9 83 aaPredicted RBP11.6□□□□□ -0.55
GCN1-209ENST00000551920 DEFB131BA0A096LNP1 70 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 DEFB130BP0DP73 79 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 DEFB130AP0DP74 79 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 DAD1P61803 113 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 LINC00612Q8N6U2 182 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 ZNF680Q8NEM1 530 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 C2CD4CQ8TF44 421 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 C11orf21Q9P2W6 132 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 KLK5Q9Y337 293 aaPredicted RBP11.59□□□□□ -0.55
GCN1-209ENST00000551920 KLF12Q9Y4X4 402 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 RYR2Q92736 4967 aa11.59□□□□□ -0.55
GCN1-209ENST00000551920 FBLL1A6NHQ2 334 aaKnown RBP11.58□□□□□ -0.56
GCN1-209ENST00000551920 GCGP01275 180 aa11.58□□□□□ -0.56
GCN1-209ENST00000551920 TCL1AP56279 114 aa11.58□□□□□ -0.56
GCN1-209ENST00000551920 MANBALQ9NQG1 85 aa11.58□□□□□ -0.56
GCN1-209ENST00000551920 NAGKQ9UJ70 344 aa11.58□□□□□ -0.56
GCN1-209ENST00000551920 TRAV21A0A0B4J279 112 aa11.57□□□□□ -0.56
GCN1-209ENST00000551920 LCE6AA0A183 80 aa11.57□□□□□ -0.56
GCN1-209ENST00000551920 HTN3P15516 51 aa11.57□□□□□ -0.56
GCN1-209ENST00000551920 PPT1P50897 306 aa11.57□□□□□ -0.56
GCN1-209ENST00000551920 DAZ2Q13117 558 aaKnown RBP11.57□□□□□ -0.56
GCN1-209ENST00000551920 TDRG1Q3Y452 100 aa11.57□□□□□ -0.56
GCN1-209ENST00000551920 IBA57Q5T440 356 aaKnown RBP11.57□□□□□ -0.56
GCN1-209ENST00000551920 Q6ZTI0 123 aa11.57□□□□□ -0.56
GCN1-209ENST00000551920 MDFICQ9P1T7 246 aa11.57□□□□□ -0.56
GCN1-209ENST00000551920 SNURFLB1AK76 121 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 IGLL5B9A064 214 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 AKR1C3P42330 323 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 TMEM183BQ1AE95 376 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 SMUG1Q53HV7 270 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 TMEM183AQ8IXX5 376 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 FMC1Q96HJ9 113 aa11.56□□□□□ -0.56
GCN1-209ENST00000551920 IGHV4-4A0A075B6R2 117 aa11.55□□□□□ -0.56
GCN1-209ENST00000551920 TRBV6-1A0A0K0K1D8 114 aa11.55□□□□□ -0.56
GCN1-209ENST00000551920 GAGE12BA1L429 117 aa11.55□□□□□ -0.56
GCN1-209ENST00000551920 GAGE7O76087 117 aa11.55□□□□□ -0.56
GCN1-209ENST00000551920 LTAP01374 205 aa11.55□□□□□ -0.56
GCN1-209ENST00000551920 PFN1P07737 140 aaKnown RBP11.55□□□□□ -0.56
GCN1-209ENST00000551920 GAGE12FP0CL80 117 aa11.55□□□□□ -0.56
GCN1-209ENST00000551920 GAGE12GP0CL81 117 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms