RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 TEX261Q6UWH6 196 aa4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 LCN15Q6UWW0 184 aa4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 SSX7Q7RTT5 188 aa4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 SUN5Q8TC36 379 aa4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 MBD3L1Q8WWY6 194 aa4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 FXYD5Q96DB9 178 aa4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 SAT2Q96F10 170 aaPredicted RBP4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 C17orf77Q96MU5 243 aa4.7□□□□□ -1.66
DEPDC4-210ENST00000551642 TRBV19A0A075B6N1 114 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 TRAV1-1A0A0B4J248 108 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 MAP1LC3B2A6NCE7 125 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 NUPR2A6NF83 97 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 OR4C46A6NHA9 309 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 H3BQ15 152 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 DNASE2O00115 360 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 ISLRO14498 428 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 IFNA7P01567 189 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 NBEAP1P0C6P0 100 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 ARL14EPLP0DKL9 152 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 PYYP10082 97 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 PSMB3P49720 205 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 FHITP49789 147 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 CMC4P56277 68 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 PDE6HQ13956 83 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 GUCA2BQ16661 112 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 ALKAL2Q6UX46 152 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 ZNF680Q8NEM1 530 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 FAM213BQ8TBF2 198 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 LRRC20Q8TCA0 184 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 SLC50A1Q9BRV3 221 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 PAXXQ9BUH6 204 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 MAP1LC3BQ9GZQ8 125 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 ZNF331Q9NQX6 463 aaPredicted RBP4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 ZNF586Q9NXT0 402 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 CLEC5AQ9NY25 188 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 SELENOKQ9Y6D0 94 aa4.69□□□□□ -1.66
DEPDC4-210ENST00000551642 PKHD1L1Q86WI1 4243 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 IGKV3-7A0A075B6H7 116 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 ZNF705EA8MWA4 302 aaPredicted RBP4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 TEX46H3BTG2 121 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 HMGB3O15347 200 aaKnown RBP4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 EIF3GO75821 320 aaKnown RBP eCLIP4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GAGE7O76087 117 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 NDUFB4O95168 129 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 OR10J4P0C629 311 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GAGE12FP0CL80 117 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GAGE12GP0CL81 117 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GAGE12IP0CL82 117 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GCHFRP30047 84 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 ID1P41134 155 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 UBE2L3P68036 154 aaKnown RBP4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 PSG9Q00887 426 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GAGE1Q13065 139 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GAGE4Q13068 117 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 FAM74A1Q5RGS3 127 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GTSCR1Q86UQ5 136 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 LYPD1Q8N2G4 141 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 GBGT1Q8N5D6 347 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 SFT2D1Q8WV19 159 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 RNF183Q96D59 192 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 TMEM167BQ9NRX6 74 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 ARL2-SNX15V9GYD0 113 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 AGRNO00468 2067 aa4.68□□□□□ -1.66
DEPDC4-210ENST00000551642 TRAV8-2A0A0B4J237 113 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 SLC17A3O00476 420 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 IGLV2-11P01706 119 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 HBE1P02100 147 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 CD7P09564 240 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 TFPI2P48307 235 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 SNRPD3P62318 126 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 FAM24BQ8N5W8 94 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 ARL6IP6Q8N6S5 226 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 LYPD6BQ8NI32 183 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 BLNKQ8WV28 456 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 MRPL53Q96EL3 112 aaKnown RBP4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 CTDSP1Q9GZU7 261 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 UBQLN2Q9UHD9 624 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 PRELID1Q9Y255 219 aa4.67□□□□□ -1.66
DEPDC4-210ENST00000551642 A0A1W2PRE2 83 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 OR11H12B2RN74 326 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 H3BTX0 84 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 SNRPCP09234 159 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 ZNF688P0C7X2 276 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 PPT1P50897 306 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 FGF8P55075 233 aaPredicted RBP4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 CD81P60033 236 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 RANP62826 216 aaKnown RBP4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 IFITM2Q01629 132 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 PSG3Q16557 428 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 ZNF767PQ75MW2 155 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 NKX6-2Q9C056 277 aaPredicted RBP4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 Q9H3A6 140 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 OTORQ9NRC9 128 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 PAM16Q9Y3D7 125 aa4.66□□□□□ -1.66
DEPDC4-210ENST00000551642 FAM74A7A6NL05 159 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 GAS8-AS1O95177 125 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 NMBP08949 121 aa4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 TAGLN2P37802 199 aaKnown RBP4.65□□□□□ -1.67
DEPDC4-210ENST00000551642 DEFB131AP59861 70 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms