RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 METTL15P1P0C7V9 234 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 GYPEP15421 78 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 ASIPP42127 132 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 TIRAPP58753 221 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 ACOT6Q3I5F7 207 aaPredicted RBP7.86□□□□□ -1.15
PTCH1-222ENST00000551425 S100A7AQ86SG5 101 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 STX12Q86Y82 276 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 TMEM252Q8N6L7 170 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 OR2T35Q8NGX2 323 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 TXNDC17Q9BRA2 123 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 MRPL16Q9NX20 251 aaKnown RBP7.86□□□□□ -1.15
PTCH1-222ENST00000551425 MBD2Q9UBB5 411 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 RNF24Q9Y225 148 aa7.86□□□□□ -1.15
PTCH1-222ENST00000551425 TRGV4A0A0C4DH28 118 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 A0A1B0GVG6 124 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 C7orf71A4D174 169 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 CCNKO75909 580 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 OR5G3P0C626 314 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 SULT1A1P50225 295 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 HNRNPA3P51991 378 aaKnown RBP7.85□□□□□ -1.15
PTCH1-222ENST00000551425 AKR1C1Q04828 323 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 MORN5Q5VZ52 161 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 CYP2G1PQ6ZSU1 146 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 GGACTQ9BVM4 153 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 TM2D2Q9BX73 214 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 BOLA1Q9Y3E2 137 aa7.85□□□□□ -1.15
PTCH1-222ENST00000551425 IGSF23A1L1A6 192 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 KLLNB2CW77 178 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 LINC00869P0C866 280 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 RPL12P30050 165 aaKnown RBP7.84□□□□□ -1.15
PTCH1-222ENST00000551425 S100A11P31949 105 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 HBG1P69891 147 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 HBG2P69892 147 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 BAXQ07812 192 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 ATP6V1FQ16864 119 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 LINC01620Q4KN68 170 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 Q5BKY6 102 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 BLNKQ8WV28 456 aa7.84□□□□□ -1.15
PTCH1-222ENST00000551425 DAZAP1Q96EP5 407 aaKnown RBP7.84□□□□□ -1.15
PTCH1-222ENST00000551425 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.83□□□□□ -1.16
PTCH1-222ENST00000551425 FNDC10F2Z333 226 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 SLC17A3O00476 420 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 CST7O76096 145 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 IGLV2-11P01706 119 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 RPL37AP61513 92 aaKnown RBP7.83□□□□□ -1.16
PTCH1-222ENST00000551425 SELENOTP62341 195 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 LAGE3Q14657 143 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 PATE2Q6UY27 113 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 SH2D6Q7Z4S9 175 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 ZNF546Q86UE3 836 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 AKAP14Q86UN6 197 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 TCTE3Q8IZS6 198 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 INO80EQ8NBZ0 244 aaPredicted RBP7.83□□□□□ -1.16
PTCH1-222ENST00000551425 NPVFQ9HCQ7 196 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 DNAJC4Q9NNZ3 241 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 PXMP4Q9Y6I8 212 aa7.83□□□□□ -1.16
PTCH1-222ENST00000551425 FXYD6-FXYD2A0A087WZ82 144 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 SMCO3A2RU48 225 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 C9JCJ5 164 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 SNRPCP09234 159 aaKnown RBP7.82□□□□□ -1.16
PTCH1-222ENST00000551425 NHLH2Q02577 135 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 CD300CQ08708 224 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 SLC38A11Q08AI6 406 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 ARL16Q0P5N6 197 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 AQP10Q96PS8 301 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 TP53TG3Q9ULZ0 132 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 HSPB11Q9Y547 144 aa7.82□□□□□ -1.16
PTCH1-222ENST00000551425 TNXBP22105 4242 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 HMSDA8MTL9 139 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 G3V3Q6 166 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 SMLR1H3BR10 107 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 LECT2O14960 151 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 MPDU1O75352 247 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 SFTA3P0C7M3 94 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 BTN1A1Q13410 526 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 BPIFA4PQ86YQ2 179 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 OR10G4Q8NGN3 311 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 OR5C1Q8NGR4 320 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 TMEM37Q8WXS4 190 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 SAT2Q96F10 170 aaPredicted RBP7.81□□□□□ -1.16
PTCH1-222ENST00000551425 ZNF479Q96JC4 524 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 FAM19A4Q96LR4 140 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 ARL6Q9H0F7 186 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 ARV1Q9H2C2 271 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 UQCC1Q9NVA1 299 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 TNFSF18Q9UNG2 199 aa7.81□□□□□ -1.16
PTCH1-222ENST00000551425 TRAV8-6A0A0B4J262 113 aa7.8□□□□□ -1.16
PTCH1-222ENST00000551425 H3BTX0 84 aa7.8□□□□□ -1.16
PTCH1-222ENST00000551425 IGLC2P0DOY2 106 aa7.8□□□□□ -1.16
PTCH1-222ENST00000551425 RNASE4P34096 147 aaKnown RBP7.8□□□□□ -1.16
PTCH1-222ENST00000551425 PPT1P50897 306 aa7.8□□□□□ -1.16
PTCH1-222ENST00000551425 VWC2Q2TAL6 325 aa7.8□□□□□ -1.16
PTCH1-222ENST00000551425 PXDC1Q5TGL8 231 aa7.8□□□□□ -1.16
PTCH1-222ENST00000551425 RBFOX3A6NFN3 312 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 H3BQ15 152 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 RGS13O14921 159 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 ARPC5O15511 151 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 IGHV3-30P01768 117 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 IGHV3-33P01772 117 aa7.79□□□□□ -1.16
PTCH1-222ENST00000551425 IGHV3-30-3P0DP02 117 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms