RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 HIST1H2BAQ96A08 127 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 LINC00467Q9BRT7 94 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 DKK2Q9UBU2 259 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 BOLA1Q9Y3E2 137 aa12.66□□□□□ -0.38
RAPGEF3-220ENST00000549347 CSMD3Q7Z407 3707 aa12.65□□□□□ -0.38
RAPGEF3-220ENST00000549347 PAGE4O60829 102 aa12.65□□□□□ -0.38
RAPGEF3-220ENST00000549347 ATP5G3P48201 142 aa12.65□□□□□ -0.38
RAPGEF3-220ENST00000549347 EMP1P54849 157 aa12.65□□□□□ -0.38
RAPGEF3-220ENST00000549347 Q6AWC8 147 aa12.65□□□□□ -0.38
RAPGEF3-220ENST00000549347 ZNF493Q6ZR52 646 aa12.65□□□□□ -0.38
RAPGEF3-220ENST00000549347 TVP23CQ96ET8 276 aa12.65□□□□□ -0.38
RAPGEF3-220ENST00000549347 NUPR2A6NF83 97 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 TEX46H3BTG2 121 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 SPART-AS1P0CW21 52 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 FLI1Q01543 452 aaPredicted RBP12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 FAM222AQ5U5X8 452 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 CST9LP1Q5W188 147 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 ALKAL2Q6UX46 152 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 SGK494Q96LW2 274 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 NDFIP1Q9BT67 221 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 TREM1Q9NP99 234 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 MANBALQ9NQG1 85 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 PSG8Q9UQ74 426 aa12.64□□□□□ -0.39
RAPGEF3-220ENST00000549347 HTN1P15515 57 aa12.63□□□□□ -0.39
RAPGEF3-220ENST00000549347 C12orf74Q32Q52 190 aa12.63□□□□□ -0.39
RAPGEF3-220ENST00000549347 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
RAPGEF3-220ENST00000549347 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 F6UZH7 168 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 CCL20P78556 96 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 ANXA2RQ3ZCQ2 193 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 CEMP1Q6PRD7 247 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 Q6ZQT7 251 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 Q6ZTC4 211 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 Q86TA4 180 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 EIF4E3Q8N5X7 224 aaKnown RBP12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 LINC00479Q96M42 142 aa12.62□□□□□ -0.39
RAPGEF3-220ENST00000549347 TRAV34A0A0B4J273 112 aa12.61□□□□□ -0.39
RAPGEF3-220ENST00000549347 C11orf94C9JXX5 98 aa12.61□□□□□ -0.39
RAPGEF3-220ENST00000549347 PRNTQ86SH4 94 aa12.61□□□□□ -0.39
RAPGEF3-220ENST00000549347 ZNF680Q8NEM1 530 aa12.61□□□□□ -0.39
RAPGEF3-220ENST00000549347 GNG13Q9P2W3 67 aa12.61□□□□□ -0.39
RAPGEF3-220ENST00000549347 IGHV1OR15-1A0A075B7D0 117 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 RGS13O14921 159 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 SAPCD1Q5SSQ6 148 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 ZNF767PQ75MW2 155 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 C11orf72Q8NBR9 251 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 FMC1Q96HJ9 113 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 C8orf49Q96NF6 230 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 KLF12Q9Y4X4 402 aa12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 TIMM8BQ9Y5J9 83 aaPredicted RBP12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 DYNC2H1Q8NCM8 4307 aaKnown RBP12.6□□□□□ -0.39
RAPGEF3-220ENST00000549347 TRAV21A0A0B4J279 112 aa12.59□□□□□ -0.39
RAPGEF3-220ENST00000549347 TRBV6-1A0A0K0K1D8 114 aa12.59□□□□□ -0.39
RAPGEF3-220ENST00000549347 CBY3A6NI87 242 aa12.59□□□□□ -0.39
RAPGEF3-220ENST00000549347 IBA57Q5T440 356 aaKnown RBP12.59□□□□□ -0.39
RAPGEF3-220ENST00000549347 TRAV10A0A0B4J240 114 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 SCO2A0A1W2PP80 73 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 AKR1C3P42330 323 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 BLOC1S1P78537 153 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 TMEM183BQ1AE95 376 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 TDRG1Q3Y452 100 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 SMUG1Q53HV7 270 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 C2CD4CQ8TF44 421 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 TXNDC17Q9BRA2 123 aa12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 KLK5Q9Y337 293 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF3-220ENST00000549347 SNURFLB1AK76 121 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 GCGP01275 180 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 IFNA1P01562 189 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 ZNF80P51504 273 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 DAD1P61803 113 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 UBE2G1P62253 170 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 DAZ2Q13117 558 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 MUC21Q5SSG8 566 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 C11orf52Q96A22 123 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 NOP10Q9NPE3 64 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 TP53TG3Q9ULZ0 132 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 ZFP30Q9Y2G7 519 aa12.57□□□□□ -0.4
RAPGEF3-220ENST00000549347 LTAP01374 205 aa12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 PFN1P07737 140 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 BCL2P10415 239 aa12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 TCL1AP56279 114 aa12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 FAM159AQ6UWV7 190 aa12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 COX8CQ7Z4L0 72 aa12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 LINC00612Q8N6U2 182 aa12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 LYPD6BQ8NI32 183 aa12.56□□□□□ -0.4
RAPGEF3-220ENST00000549347 S100A9P06702 114 aaKnown RBP12.55□□□□□ -0.4
RAPGEF3-220ENST00000549347 TAGLN2P37802 199 aaKnown RBP12.55□□□□□ -0.4
RAPGEF3-220ENST00000549347 MEF2BQ02080 365 aaPredicted RBP12.55□□□□□ -0.4
RAPGEF3-220ENST00000549347 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
RAPGEF3-220ENST00000549347 GSN-AS1Q9NRJ2 163 aa12.55□□□□□ -0.4
RAPGEF3-220ENST00000549347 NAGKQ9UJ70 344 aa12.55□□□□□ -0.4
RAPGEF3-220ENST00000549347 TRGV11A0A075B6L2 103 aa12.54□□□□□ -0.4
RAPGEF3-220ENST00000549347 DEFB131BA0A096LNP1 70 aa12.54□□□□□ -0.4
RAPGEF3-220ENST00000549347 PLECQ15149 4684 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-220ENST00000549347 VAX2Q9UIW0 290 aa12.54□□□□□ -0.4
RAPGEF3-220ENST00000549347 KMT2CQ8NEZ4 4911 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-220ENST00000549347 DEFB130BP0DP73 79 aa12.53□□□□□ -0.4
RAPGEF3-220ENST00000549347 DEFB130AP0DP74 79 aa12.53□□□□□ -0.4
RAPGEF3-220ENST00000549347 TMEM183AQ8IXX5 376 aa12.53□□□□□ -0.4
RAPGEF3-220ENST00000549347 KCNS1Q96KK3 526 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms