RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 FAM19A4Q96LR4 140 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 PRR25Q96S07 402 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 SAV1Q9H4B6 383 aaPredicted RBP6□□□□□ -1.45
DEPDC4-207ENST00000549249 PPP1R14DQ9NXH3 145 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 ZNF492Q9P255 531 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 ZFP30Q9Y2G7 519 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 TENM1Q9UKZ4 2725 aa6□□□□□ -1.45
DEPDC4-207ENST00000549249 TRRAPQ9Y4A5 3859 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 CMYA5Q8N3K9 4069 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 A0A087WWC5 75 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 C19orf71A6NCJ1 209 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 FBLL1A6NHQ2 334 aaKnown RBP5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 KNCNA6PVL3 124 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 B4DEV8 164 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 CD7P09564 240 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 IGLL1P15814 213 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 CRIP1P50238 77 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 ZNF80P51504 273 aaPredicted RBP5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 TMEM78Q5T7P6 136 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 PRR9Q5T870 116 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 FOXI2Q6ZQN5 318 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 CBLN2Q8IUK8 224 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 ZFAND2AQ8N6M9 145 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 SFRP2Q96HF1 295 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 LINC00477Q96M19 166 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 RNASE7Q9H1E1 156 aaKnown RBP5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 WFDC10AQ9H1F0 79 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 RPS10P5Q9NQ39 176 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 V9GYV3 84 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 NOTCH3Q9UM47 2321 aa5.99□□□□□ -1.45
DEPDC4-207ENST00000549249 RBMY1BA6NDE4 496 aaKnown RBP5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 RBMY1EA6NEQ0 496 aaKnown RBP5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 RBMY1DP0C7P1 496 aaKnown RBP5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 HLA-DRB4P13762 266 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 INSL3P51460 131 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 KIR3DS1Q14943 382 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 PRR27Q6MZM9 219 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 TMEM88Q6PEY1 159 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 AMTNQ6UX39 209 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 FAM231DQ6ZW35 169 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 APRG1Q8IVJ8 170 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 OR10G8Q8NGN5 311 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 OSTCQ9NRP0 149 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 LENEPQ9Y5L5 61 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 HLA-DRB4X5D2U9 266 aa5.98□□□□□ -1.45
DEPDC4-207ENST00000549249 H3BMM0 161 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 IGKV3-20P01619 116 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 CRISP2P16562 243 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 SMUG1Q53HV7 270 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 ACTL10Q5JWF8 245 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 SAPCD1Q5SSQ6 148 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 EBLN2Q6P2I7 272 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 Q6ZQT7 251 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 NUDT10Q8NFP7 164 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 ANAPC16Q96DE5 110 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 NUDT11Q96G61 164 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 YPEL4Q96NS1 127 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 ODF3Q96PU9 254 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 NDFIP1Q9BT67 221 aa5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 MCRIP2Q9BUT9 160 aaKnown RBP5.97□□□□□ -1.45
DEPDC4-207ENST00000549249 MEGF8Q7Z7M0 2845 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 TRBV7-9A0A0J9YWB2 115 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 KLLNB2CW77 178 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 OR11H12B2RN74 326 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 H7BYZ3 331 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 J3KRW8 73 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 SH2D1AO60880 128 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 DUSP14O95147 198 aaKnown RBP5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 MT-ND4LP03901 98 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 ERVFC1-1P60608 527 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 RPL19P84098 196 aaKnown RBP5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 DEFA6Q01524 100 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 BTN1A1Q13410 526 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 IBA57Q5T440 356 aaKnown RBP5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 ZNF575Q86XF7 245 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 OR4B1Q8NGF8 309 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 FAM110AQ9BQ89 295 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 CTDSP1Q9GZU7 261 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 C11orf21Q9P2W6 132 aa5.96□□□□□ -1.46
DEPDC4-207ENST00000549249 ZNF705GA8MUZ8 300 aaPredicted RBP5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 M0R2Z0 102 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 PPP1R2P9O14990 202 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 GATCO43716 136 aaKnown RBP5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 CA1P00915 261 aaPredicted RBP5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 PFN1P07737 140 aaKnown RBP5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 FXYD7P58549 80 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 SPINK13Q1W4C9 94 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 FAM162BQ5T6X4 162 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 TRPT1Q86TN4 253 aaKnown RBP5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 C15orf54Q8N8G6 183 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 CLUHP3Q96NS8 147 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 BIN3Q9NQY0 253 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 SMCO4Q9NRQ5 59 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 TMEM242Q9NWH2 141 aa5.95□□□□□ -1.46
DEPDC4-207ENST00000549249 TRAV12-2A0A075B6T6 113 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 CRXO43186 299 aaPredicted RBP5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 P01737 135 aa5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 RBMY1A1P0DJD3 496 aaKnown RBP5.94□□□□□ -1.46
DEPDC4-207ENST00000549249 RBMY1CP0DJD4 496 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms