RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 SSNA1O43805 119 aa11.95□□□□□ -0.5
CHMP1A-205ENST00000548650 BTF3P20290 206 aaKnown RBP11.95□□□□□ -0.5
CHMP1A-205ENST00000548650 ZNF138P52744 262 aa11.95□□□□□ -0.5
CHMP1A-205ENST00000548650 ATP5SQ99766 215 aa11.95□□□□□ -0.5
CHMP1A-205ENST00000548650 ARPC5LQ9BPX5 153 aa11.95□□□□□ -0.5
CHMP1A-205ENST00000548650 DNAH5Q8TE73 4624 aa11.95□□□□□ -0.5
CHMP1A-205ENST00000548650 OR7C2O60412 319 aa11.94□□□□□ -0.5
CHMP1A-205ENST00000548650 IGHV3-53P01767 116 aa11.94□□□□□ -0.5
CHMP1A-205ENST00000548650 LINC00315P59091 139 aa11.94□□□□□ -0.5
CHMP1A-205ENST00000548650 KRTAP10-2P60368 255 aa11.94□□□□□ -0.5
CHMP1A-205ENST00000548650 CYCSP99999 105 aaKnown RBP11.94□□□□□ -0.5
CHMP1A-205ENST00000548650 PPP1R1CQ8WVI7 109 aa11.94□□□□□ -0.5
CHMP1A-205ENST00000548650 RBAKDNA6NC62 111 aa11.93□□□□□ -0.5
CHMP1A-205ENST00000548650 C17orf112F2Z3M2 114 aa11.93□□□□□ -0.5
CHMP1A-205ENST00000548650 UBE2L3P68036 154 aaKnown RBP11.93□□□□□ -0.5
CHMP1A-205ENST00000548650 ZNF415Q09FC8 603 aa11.93□□□□□ -0.5
CHMP1A-205ENST00000548650 Q6ZRN7 208 aaPredicted RBP11.93□□□□□ -0.5
CHMP1A-205ENST00000548650 MAPKAPK5-AS1Q8N8E1 139 aa11.93□□□□□ -0.5
CHMP1A-205ENST00000548650 ICOSQ9Y6W8 199 aa11.93□□□□□ -0.5
CHMP1A-205ENST00000548650 PAX4O43316 350 aa11.92□□□□□ -0.5
CHMP1A-205ENST00000548650 ZNF266Q14584 549 aa11.92□□□□□ -0.5
CHMP1A-205ENST00000548650 PRO0255Q9UI72 69 aa11.92□□□□□ -0.5
CHMP1A-205ENST00000548650 HSPB11Q9Y547 144 aa11.92□□□□□ -0.5
CHMP1A-205ENST00000548650 SIVA1O15304 175 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 NXPH4O95158 308 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 CSN1S1P47710 185 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 CRYBA4P53673 196 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 RANP62826 216 aaKnown RBP11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 FHL2Q14192 279 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 FFAR4Q5NUL3 377 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 MUC21Q5SSG8 566 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 LYPD1Q8N2G4 141 aa11.91□□□□□ -0.5
CHMP1A-205ENST00000548650 MPC2O95563 127 aa11.9□□□□□ -0.5
CHMP1A-205ENST00000548650 PTTG1O95997 202 aa11.9□□□□□ -0.5
CHMP1A-205ENST00000548650 KHDC3LQ587J8 217 aa11.9□□□□□ -0.5
CHMP1A-205ENST00000548650 Q6AWC8 147 aa11.9□□□□□ -0.5
CHMP1A-205ENST00000548650 C8orf49Q96NF6 230 aa11.9□□□□□ -0.5
CHMP1A-205ENST00000548650 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
CHMP1A-205ENST00000548650 ALG5Q9Y673 324 aa11.9□□□□□ -0.5
CHMP1A-205ENST00000548650 DIRC3C9JPN6 131 aa11.89□□□□□ -0.51
CHMP1A-205ENST00000548650 PET100P0DJ07 73 aa11.89□□□□□ -0.51
CHMP1A-205ENST00000548650 SMIM3Q9BZL3 60 aa11.89□□□□□ -0.51
CHMP1A-205ENST00000548650 LENEPQ9Y5L5 61 aa11.89□□□□□ -0.51
CHMP1A-205ENST00000548650 EIF3GO75821 320 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHMP1A-205ENST00000548650 SLAQ13239 276 aa11.88□□□□□ -0.51
CHMP1A-205ENST00000548650 MBD2Q9UBB5 411 aa11.88□□□□□ -0.51
CHMP1A-205ENST00000548650 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
CHMP1A-205ENST00000548650 RPL12P30050 165 aaKnown RBP11.87□□□□□ -0.51
CHMP1A-205ENST00000548650 TAS2R45P59539 299 aa11.87□□□□□ -0.51
CHMP1A-205ENST00000548650 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
CHMP1A-205ENST00000548650 TMEM183AQ8IXX5 376 aa11.87□□□□□ -0.51
CHMP1A-205ENST00000548650 Q8N1X5 172 aa11.87□□□□□ -0.51
CHMP1A-205ENST00000548650 TMED6Q8WW62 240 aa11.87□□□□□ -0.51
CHMP1A-205ENST00000548650 ZNF479Q96JC4 524 aa11.87□□□□□ -0.51
CHMP1A-205ENST00000548650 IFNA5P01569 189 aa11.86□□□□□ -0.51
CHMP1A-205ENST00000548650 SFTA3P0C7M3 94 aa11.86□□□□□ -0.51
CHMP1A-205ENST00000548650 MRPL23Q16540 153 aaKnown RBP11.86□□□□□ -0.51
CHMP1A-205ENST00000548650 LYPD5Q6UWN5 251 aa11.86□□□□□ -0.51
CHMP1A-205ENST00000548650 OR10G4Q8NGN3 311 aa11.86□□□□□ -0.51
CHMP1A-205ENST00000548650 RASL10AQ92737 203 aa11.86□□□□□ -0.51
CHMP1A-205ENST00000548650 TRGV11A0A075B6L2 103 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 TRGV4A0A0C4DH28 118 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 TDRG1Q3Y452 100 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 NEGR1Q7Z3B1 354 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 IQCF2Q8IXL9 164 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 SCGB1C1Q8TD33 95 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 HYLS1Q96M11 299 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 SPXQ9BT56 116 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 OTORQ9NRC9 128 aa11.85□□□□□ -0.51
CHMP1A-205ENST00000548650 K7EQD1 137 aa11.84□□□□□ -0.51
CHMP1A-205ENST00000548650 RAB2AP61019 212 aa11.84□□□□□ -0.51
CHMP1A-205ENST00000548650 FAM159AQ6UWV7 190 aa11.84□□□□□ -0.51
CHMP1A-205ENST00000548650 NAGKQ9UJ70 344 aa11.84□□□□□ -0.51
CHMP1A-205ENST00000548650 RPH3ALQ9UNE2 315 aa11.84□□□□□ -0.51
CHMP1A-205ENST00000548650 SRIP30626 198 aa11.83□□□□□ -0.52
CHMP1A-205ENST00000548650 PQLC2Q6ZP29 291 aa11.83□□□□□ -0.52
CHMP1A-205ENST00000548650 GOLT1AQ6ZVE7 132 aa11.83□□□□□ -0.52
CHMP1A-205ENST00000548650 WFDC10BQ8IUB3 73 aa11.83□□□□□ -0.52
CHMP1A-205ENST00000548650 CMTM2Q8TAZ6 248 aa11.83□□□□□ -0.52
CHMP1A-205ENST00000548650 MED28Q9H204 178 aa11.83□□□□□ -0.52
CHMP1A-205ENST00000548650 TNFRSF18Q9Y5U5 241 aa11.83□□□□□ -0.52
CHMP1A-205ENST00000548650 TRAV8-1A0A0A6YYK1 113 aa11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 PGPA6NDG6 321 aa11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 F6UZH7 168 aa11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 GYPEP15421 78 aa11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 ERVFC1-1P60608 527 aa11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 ACOT6Q3I5F7 207 aaPredicted RBP11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 TVP23CQ96ET8 276 aa11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 SCRT2Q9NQ03 307 aa11.82□□□□□ -0.52
CHMP1A-205ENST00000548650 TRAV4A0A0B4J268 109 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 IGHV3-16A0A0C4DH30 117 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 ORM1P02763 201 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 GNG5P63218 68 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 RGS21Q2M5E4 152 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 FAM74A1Q5RGS3 127 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 ARL6IP6Q8N6S5 226 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 PCNPQ8WW12 178 aaKnown RBP11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 LY96Q9Y6Y9 160 aa11.81□□□□□ -0.52
CHMP1A-205ENST00000548650 TRAV21A0A0B4J279 112 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 366.4 ms