RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SUN5Q8TC36 379 aa9.77□□□□□ -0.85
PTCH1-217ENST00000548420 RNASE8Q8TDE3 154 aaKnown RBP9.77□□□□□ -0.85
PTCH1-217ENST00000548420 VGLL1Q99990 258 aa9.77□□□□□ -0.85
PTCH1-217ENST00000548420 Q9H3A6 140 aa9.77□□□□□ -0.85
PTCH1-217ENST00000548420 IGKV2-40A0A087WW87 121 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-217ENST00000548420 IGKV2D-40P01614 121 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-217ENST00000548420 MBP02144 154 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 STAG3L2P0CL84 134 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 STAG3L3P0CL85 134 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 Q6ZSN1 163 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 ZFAND2AQ8N6M9 145 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 RAB24Q969Q5 203 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 GNPNAT1Q96EK6 184 aaPredicted RBP9.76□□□□□ -0.85
PTCH1-217ENST00000548420 C16orf74Q96GX8 76 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 SH3BGRL3Q9H299 93 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 ZNF492Q9P255 531 aa9.76□□□□□ -0.85
PTCH1-217ENST00000548420 BORCS7-ASMTA0A0B4J1R7 106 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 TRAV12-3A0A0B4J271 114 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 TAAR5O14804 337 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 CDC34P49427 236 aaPredicted RBP9.75□□□□□ -0.85
PTCH1-217ENST00000548420 TMEM78Q5T7P6 136 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 RXFP4Q8TDU9 374 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
PTCH1-217ENST00000548420 FAM210BQ96KR6 192 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 LINC00467Q9BRT7 94 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 OTORQ9NRC9 128 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 CYTL1Q9NRR1 136 aa9.75□□□□□ -0.85
PTCH1-217ENST00000548420 C7orf71A4D174 169 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 PGPA6NDG6 321 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 HMSDA8MTL9 139 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 DIRC3C9JPN6 131 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 SMLR1H3BR10 107 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 HTN1P15515 57 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 CSN1S1P47710 185 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 ZNF138P52744 262 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 DAD1P61803 113 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 CD300CQ08708 224 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 PYGO2Q9BRQ0 406 aa9.74□□□□□ -0.85
PTCH1-217ENST00000548420 TIMM8BQ9Y5J9 83 aaPredicted RBP9.74□□□□□ -0.85
PTCH1-217ENST00000548420 J3KRW8 73 aa9.73□□□□□ -0.85
PTCH1-217ENST00000548420 HMGB3O15347 200 aaKnown RBP9.73□□□□□ -0.85
PTCH1-217ENST00000548420 ARPC5O15511 151 aa9.73□□□□□ -0.85
PTCH1-217ENST00000548420 ARL14EPLP0DKL9 152 aa9.73□□□□□ -0.85
PTCH1-217ENST00000548420 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
PTCH1-217ENST00000548420 OR11H4Q8NGC9 324 aa9.73□□□□□ -0.85
PTCH1-217ENST00000548420 TMED6Q8WW62 240 aa9.73□□□□□ -0.85
PTCH1-217ENST00000548420 LENEPQ9Y5L5 61 aa9.73□□□□□ -0.85
PTCH1-217ENST00000548420 PKHD1L1Q86WI1 4243 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 FAM229AH3BQW9 127 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 GPX1P07203 203 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 GCHFRP30047 84 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 HAMPP81172 84 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 BTN1A1Q13410 526 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 ZNF345Q14585 488 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 PRR9Q5T870 116 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 CCDC28AQ8IWP9 274 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 KCNRGQ8N5I3 272 aa9.72□□□□□ -0.85
PTCH1-217ENST00000548420 ACTR3CQ9C0K3 210 aaPredicted RBP9.72□□□□□ -0.85
PTCH1-217ENST00000548420 CBY3A6NI87 242 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 CXorf1O96002 111 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 RNASE4P34096 147 aaKnown RBP9.71□□□□□ -0.86
PTCH1-217ENST00000548420 DAZ2Q13117 558 aaKnown RBP9.71□□□□□ -0.86
PTCH1-217ENST00000548420 ZNF726P1Q15940 193 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 ANXA2RQ3ZCQ2 193 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 FAM74A1Q5RGS3 127 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 SSX7Q7RTT5 188 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 ZNRF2Q8NHG8 242 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 ST6GAL2Q96JF0 529 aa9.71□□□□□ -0.86
PTCH1-217ENST00000548420 NOP10Q9NPE3 64 aaKnown RBP9.71□□□□□ -0.86
PTCH1-217ENST00000548420 Q6ZQT7 251 aa9.7□□□□□ -0.86
PTCH1-217ENST00000548420 C11orf72Q8NBR9 251 aa9.7□□□□□ -0.86
PTCH1-217ENST00000548420 Q8TAT8 98 aa9.7□□□□□ -0.86
PTCH1-217ENST00000548420 HYLS1Q96M11 299 aa9.7□□□□□ -0.86
PTCH1-217ENST00000548420 CTXND1A0A1B0GTU2 59 aa9.69□□□□□ -0.86
PTCH1-217ENST00000548420 DEFB130BP0DP73 79 aa9.69□□□□□ -0.86
PTCH1-217ENST00000548420 DEFB130AP0DP74 79 aa9.69□□□□□ -0.86
PTCH1-217ENST00000548420 BTF3P20290 206 aaKnown RBP9.69□□□□□ -0.86
PTCH1-217ENST00000548420 Q6AWC8 147 aa9.69□□□□□ -0.86
PTCH1-217ENST00000548420 EIF4E3Q8N5X7 224 aaKnown RBP9.69□□□□□ -0.86
PTCH1-217ENST00000548420 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
PTCH1-217ENST00000548420 TMEM167BQ9NRX6 74 aa9.69□□□□□ -0.86
PTCH1-217ENST00000548420 A0A0D9SG52 128 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 ATP5G1P05496 136 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 ATP5G3P48201 142 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 Q6ZNX1 250 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 GOLT1AQ6ZVE7 132 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 C5orf17Q8NAS9 161 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 ZNF680Q8NEM1 530 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 TVP23CQ96ET8 276 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 ARPC5LQ9BPX5 153 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
PTCH1-217ENST00000548420 IGHV1OR15-1A0A075B7D0 117 aa9.67□□□□□ -0.86
PTCH1-217ENST00000548420 SERTM2A0A1B0GWG4 89 aa9.67□□□□□ -0.86
PTCH1-217ENST00000548420 A0A1W2PRE2 83 aa9.67□□□□□ -0.86
PTCH1-217ENST00000548420 SNURFLB1AK76 121 aa9.67□□□□□ -0.86
PTCH1-217ENST00000548420 HTN3P15516 51 aa9.67□□□□□ -0.86
PTCH1-217ENST00000548420 SUMO1P63165 101 aaKnown RBP9.67□□□□□ -0.86
PTCH1-217ENST00000548420 GNG5P63218 68 aa9.67□□□□□ -0.86
PTCH1-217ENST00000548420 AKR1C8PQ5T2L2 129 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms