RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 PFDN1O60925 122 aa13.26□□□□□ -0.29
PRPF40B-206ENST00000547764 TCRAP04437 139 aa13.26□□□□□ -0.29
PRPF40B-206ENST00000547764 SEC11BP0C7V7 166 aa13.26□□□□□ -0.29
PRPF40B-206ENST00000547764 EIF4E3Q8N5X7 224 aaKnown RBP13.26□□□□□ -0.29
PRPF40B-206ENST00000547764 hCG_2014768A0A024R1R8 64 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 A0A1W2PRE2 83 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 MAP1LC3B2A6NCE7 125 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 CBY3A6NI87 242 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 SNURFLB1AK76 121 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 RGS13O14921 159 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 FHITP49789 147 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 ANXA2RQ3ZCQ2 193 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 SGK494Q96LW2 274 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 NDUFAF3Q9BU61 184 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 MAP1LC3BQ9GZQ8 125 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 EPDR1Q9UM22 224 aa13.25□□□□□ -0.29
PRPF40B-206ENST00000547764 VPS13DQ5THJ4 4388 aa13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 SERTM2A0A1B0GWG4 89 aa13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 EIF5AP63241 154 aaKnown RBP13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 LGALSLQ3ZCW2 172 aaPredicted RBP13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 C11orf72Q8NBR9 251 aa13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 TVP23CQ96ET8 276 aa13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 GSN-AS1Q9NRJ2 163 aa13.24□□□□□ -0.29
PRPF40B-206ENST00000547764 UMAD1C9J7I0 102 aa13.23□□□□□ -0.29
PRPF40B-206ENST00000547764 UBE2G2P60604 165 aa13.23□□□□□ -0.29
PRPF40B-206ENST00000547764 Q6AWC8 147 aa13.23□□□□□ -0.29
PRPF40B-206ENST00000547764 LINC00612Q8N6U2 182 aa13.23□□□□□ -0.29
PRPF40B-206ENST00000547764 ZNF680Q8NEM1 530 aa13.23□□□□□ -0.29
PRPF40B-206ENST00000547764 FAM210BQ96KR6 192 aa13.23□□□□□ -0.29
PRPF40B-206ENST00000547764 TP53TG3Q9ULZ0 132 aa13.23□□□□□ -0.29
PRPF40B-206ENST00000547764 K7EQM0 130 aa13.22□□□□□ -0.29
PRPF40B-206ENST00000547764 C1QBP02746 253 aa13.22□□□□□ -0.29
PRPF40B-206ENST00000547764 ATP5G1P05496 136 aa13.22□□□□□ -0.29
PRPF40B-206ENST00000547764 TPT1P13693 172 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-206ENST00000547764 ATP5G3P48201 142 aa13.22□□□□□ -0.29
PRPF40B-206ENST00000547764 DAZ2Q13117 558 aaKnown RBP13.22□□□□□ -0.29
PRPF40B-206ENST00000547764 TREM1Q9NP99 234 aa13.22□□□□□ -0.29
PRPF40B-206ENST00000547764 FAM74A7A6NL05 159 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 IGLV2-11P01706 119 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 MUC21Q5SSG8 566 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 AKAP14Q86UN6 197 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 CYB561D1Q8N8Q1 229 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 STOML3Q8TAV4 291 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 FAM213BQ8TBF2 198 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 ATG101Q9BSB4 218 aa13.21□□□□□ -0.29
PRPF40B-206ENST00000547764 GAGE12BA1L429 117 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 F5H768 121 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 F6UZH7 168 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 GAGE7O76087 117 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 IFNA7P01567 189 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 GAGE12FP0CL80 117 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 GAGE12GP0CL81 117 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 GAGE12IP0CL82 117 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 IBA57Q5T440 356 aaKnown RBP13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 TMEM88Q6PEY1 159 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 Q6ZTI0 123 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 MBD3L1Q8WWY6 194 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 NKX6-2Q9C056 277 aaPredicted RBP13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 PSG8Q9UQ74 426 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 KLF12Q9Y4X4 402 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 KMT2AQ03164 3969 aa13.2□□□□□ -0.3
PRPF40B-206ENST00000547764 TCL1AP56279 114 aa13.19□□□□□ -0.3
PRPF40B-206ENST00000547764 FLI1Q01543 452 aaPredicted RBP13.19□□□□□ -0.3
PRPF40B-206ENST00000547764 DPPA3Q6W0C5 159 aa13.19□□□□□ -0.3
PRPF40B-206ENST00000547764 TMEM75Q8N9X5 138 aa13.19□□□□□ -0.3
PRPF40B-206ENST00000547764 SFT2D1Q8WV19 159 aa13.19□□□□□ -0.3
PRPF40B-206ENST00000547764 NDFIP1Q9BT67 221 aa13.19□□□□□ -0.3
PRPF40B-206ENST00000547764 FAM159AQ6UWV7 190 aa13.18□□□□□ -0.3
PRPF40B-206ENST00000547764 PRNTQ86SH4 94 aa13.18□□□□□ -0.3
PRPF40B-206ENST00000547764 LINC00479Q96M42 142 aa13.18□□□□□ -0.3
PRPF40B-206ENST00000547764 C8orf49Q96NF6 230 aa13.18□□□□□ -0.3
PRPF40B-206ENST00000547764 TRAV21A0A0B4J279 112 aa13.17□□□□□ -0.3
PRPF40B-206ENST00000547764 FBLL1A6NHQ2 334 aaKnown RBP13.17□□□□□ -0.3
PRPF40B-206ENST00000547764 PEX7O00628 323 aa13.17□□□□□ -0.3
PRPF40B-206ENST00000547764 NAGKQ9UJ70 344 aa13.17□□□□□ -0.3
PRPF40B-206ENST00000547764 TRGV1A0A0A0MS02 117 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 TRAV34A0A0B4J273 112 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 A0A1B0GV50 99 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 SPINK4O60575 86 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 TMEM183BQ1AE95 376 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 TDRG1Q3Y452 100 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 TMEM183AQ8IXX5 376 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 HIST1H2BAQ96A08 127 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 MDFICQ9P1T7 246 aa13.16□□□□□ -0.3
PRPF40B-206ENST00000547764 A0A1B0GVG6 124 aa13.15□□□□□ -0.3
PRPF40B-206ENST00000547764 H2AFB1P0C5Y9 115 aa13.15□□□□□ -0.3
PRPF40B-206ENST00000547764 P0DMU3 169 aa13.15□□□□□ -0.3
PRPF40B-206ENST00000547764 FAM231AP0DMU4 169 aa13.15□□□□□ -0.3
PRPF40B-206ENST00000547764 FAM231CP0DMU5 169 aa13.15□□□□□ -0.3
PRPF40B-206ENST00000547764 ZNF80P51504 273 aaPredicted RBP13.15□□□□□ -0.3
PRPF40B-206ENST00000547764 CST9LP1Q5W188 147 aa13.15□□□□□ -0.3
PRPF40B-206ENST00000547764 TRGV11A0A075B6L2 103 aa13.14□□□□□ -0.31
PRPF40B-206ENST00000547764 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
PRPF40B-206ENST00000547764 PAGE4O60829 102 aa13.14□□□□□ -0.31
PRPF40B-206ENST00000547764 GCGP01275 180 aa13.14□□□□□ -0.31
PRPF40B-206ENST00000547764 HOXA5P20719 270 aa13.14□□□□□ -0.31
PRPF40B-206ENST00000547764 PPT1P50897 306 aa13.14□□□□□ -0.31
PRPF40B-206ENST00000547764 OR5I1Q13606 314 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms