RNA–Protein interactions for RNA: ENST00000547701.5

CTDSP2-203, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 988 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-203ENST00000547701 SNURFLB1AK76 121 aa16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 SEC11BP0C7V7 166 aa16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 P0DMU3 169 aa16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 FAM231AP0DMU4 169 aa16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 FAM231CP0DMU5 169 aa16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 C15orf53Q8NAA6 179 aa16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 Q8TAT8 98 aa16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 NKX6-2Q9C056 277 aaPredicted RBP16.41■□□□□ 0.22
CTDSP2-203ENST00000547701 DNAH6Q9C0G6 4158 aa16.4■□□□□ 0.22
CTDSP2-203ENST00000547701 IGHV1OR15-1A0A075B7D0 117 aa16.4■□□□□ 0.22
CTDSP2-203ENST00000547701 TCRAP04437 139 aa16.4■□□□□ 0.22
CTDSP2-203ENST00000547701 DEFB130BP0DP73 79 aa16.4■□□□□ 0.22
CTDSP2-203ENST00000547701 DEFB130AP0DP74 79 aa16.4■□□□□ 0.22
CTDSP2-203ENST00000547701 TCL1AP56279 114 aa16.4■□□□□ 0.22
CTDSP2-203ENST00000547701 TDRG1Q3Y452 100 aa16.4■□□□□ 0.22
CTDSP2-203ENST00000547701 MUC4Q99102 2169 aa16.39■□□□□ 0.21
CTDSP2-203ENST00000547701 GOLT1AQ6ZVE7 132 aa16.39■□□□□ 0.21
CTDSP2-203ENST00000547701 TCTE3Q8IZS6 198 aa16.39■□□□□ 0.21
CTDSP2-203ENST00000547701 GGTLC3B5MD39 225 aa16.38■□□□□ 0.21
CTDSP2-203ENST00000547701 UMAD1C9J7I0 102 aa16.38■□□□□ 0.21
CTDSP2-203ENST00000547701 SUMO1P63165 101 aaKnown RBP16.38■□□□□ 0.21
CTDSP2-203ENST00000547701 EIF5AP63241 154 aaKnown RBP16.38■□□□□ 0.21
CTDSP2-203ENST00000547701 LGALS9BQ3B8N2 356 aa16.38■□□□□ 0.21
CTDSP2-203ENST00000547701 EPDR1Q9UM22 224 aa16.38■□□□□ 0.21
CTDSP2-203ENST00000547701 K7EQM0 130 aa16.37■□□□□ 0.21
CTDSP2-203ENST00000547701 RGS13O14921 159 aa16.37■□□□□ 0.21
CTDSP2-203ENST00000547701 BCL2L11O43521 198 aa16.37■□□□□ 0.21
CTDSP2-203ENST00000547701 TVP23CQ96ET8 276 aa16.37■□□□□ 0.21
CTDSP2-203ENST00000547701 KANTRA0A1W2PQU2 76 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 SPINK4O60575 86 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 RNF212Q495C1 297 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 TMEM88Q6PEY1 159 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 POM121L12Q8N7R1 296 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 GSN-AS1Q9NRJ2 163 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 KLF12Q9Y4X4 402 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 ARL2-SNX15V9GYD0 113 aa16.36■□□□□ 0.21
CTDSP2-203ENST00000547701 IGLV2-11P01706 119 aa16.35■□□□□ 0.21
CTDSP2-203ENST00000547701 Q6ZQT7 251 aa16.35■□□□□ 0.21
CTDSP2-203ENST00000547701 TMEM75Q8N9X5 138 aa16.35■□□□□ 0.21
CTDSP2-203ENST00000547701 ATG101Q9BSB4 218 aa16.35■□□□□ 0.21
CTDSP2-203ENST00000547701 TRAV8-1A0A0A6YYK1 113 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 H3BNG1 76 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 HTN3P15516 51 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 FHITP49789 147 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 GNG5P63218 68 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 DPPA3Q6W0C5 159 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 CYB561D1Q8N8Q1 229 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 STOML3Q8TAV4 291 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 MBD3L1Q8WWY6 194 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 TCEAL7Q9BRU2 100 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 TREM1Q9NP99 234 aa16.34■□□□□ 0.21
CTDSP2-203ENST00000547701 TRAV21A0A0B4J279 112 aa16.33■□□□□ 0.2
CTDSP2-203ENST00000547701 MAP1LC3B2A6NCE7 125 aa16.33■□□□□ 0.2
CTDSP2-203ENST00000547701 TMUB2Q71RG4 321 aa16.33■□□□□ 0.2
CTDSP2-203ENST00000547701 MAP1LC3BQ9GZQ8 125 aa16.33■□□□□ 0.2
CTDSP2-203ENST00000547701 FAM74A7A6NL05 159 aa16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 F5H768 121 aa16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 FAM3BP58499 235 aaPredicted RBP16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 Q6ZTI0 123 aa16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 HIST1H2BAQ96A08 127 aa16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 NDFIP1Q9BT67 221 aa16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 ZNF471Q9BX82 626 aaPredicted RBP16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 TMPRSS5Q9H3S3 457 aa16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 RPH3ALQ9UNE2 315 aa16.32■□□□□ 0.2
CTDSP2-203ENST00000547701 GAGE12BA1L429 117 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 GAGE7O76087 117 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 GAGE12FP0CL80 117 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 GAGE12GP0CL81 117 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 GAGE12IP0CL82 117 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 FLI1Q01543 452 aaPredicted RBP16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 LGALSLQ3ZCW2 172 aaPredicted RBP16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 FAM159AQ6UWV7 190 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 SPXQ9BT56 116 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 PSG8Q9UQ74 426 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 NACAE9PAV3 2078 aa16.31■□□□□ 0.2
CTDSP2-203ENST00000547701 TRGV11A0A075B6L2 103 aa16.3■□□□□ 0.2
CTDSP2-203ENST00000547701 ZNF415Q09FC8 603 aa16.3■□□□□ 0.2
CTDSP2-203ENST00000547701 SAPCD1Q5SSQ6 148 aa16.3■□□□□ 0.2
CTDSP2-203ENST00000547701 C1QBP02746 253 aa16.29■□□□□ 0.2
CTDSP2-203ENST00000547701 TPT1P13693 172 aaKnown RBP16.29■□□□□ 0.2
CTDSP2-203ENST00000547701 COX8CQ7Z4L0 72 aa16.29■□□□□ 0.2
CTDSP2-203ENST00000547701 RASL10AQ92737 203 aa16.29■□□□□ 0.2
CTDSP2-203ENST00000547701 KCNS1Q96KK3 526 aa16.29■□□□□ 0.2
CTDSP2-203ENST00000547701 FGF8P55075 233 aaPredicted RBP16.28■□□□□ 0.2
CTDSP2-203ENST00000547701 HOXA5P20719 270 aa16.27■□□□□ 0.2
CTDSP2-203ENST00000547701 IQCF2Q8IXL9 164 aa16.27■□□□□ 0.2
CTDSP2-203ENST00000547701 TRGV1A0A0A0MS02 117 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 TRBV6-1A0A0K0K1D8 114 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 PFDN1O60925 122 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 PFN1P07737 140 aaKnown RBP16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 PPT1P50897 306 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 RAB5CP51148 216 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 SMUG1Q53HV7 270 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 MUC21Q5SSG8 566 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 MDFICQ9P1T7 246 aa16.26■□□□□ 0.19
CTDSP2-203ENST00000547701 TRGV2A0A075B6R0 118 aa16.25■□□□□ 0.19
CTDSP2-203ENST00000547701 PEX7O00628 323 aa16.25■□□□□ 0.19
CTDSP2-203ENST00000547701 EIF5AL1Q6IS14 154 aaKnown RBP16.25■□□□□ 0.19
CTDSP2-203ENST00000547701 TRAV1-1A0A0B4J248 108 aa16.24■□□□□ 0.19
CTDSP2-203ENST00000547701 IGHV3-16A0A0C4DH30 117 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms