RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 A8MWP6 167 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 NDUFA7O95182 113 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 TRBV12-3P01733 135 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 PSMB8P28062 276 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 WFDC12Q8WWY7 111 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 PRR25Q96S07 402 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 VGLL1Q99990 258 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 SLC50A1Q9BRV3 221 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 RNF114Q9Y508 228 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 SHISA2Q6UWI4 295 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 COX8CQ7Z4L0 72 aa12.62□□□□□ -0.39
CHMP1A-204ENST00000547687 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 A0A0G2JLM5 398 aa12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 SAMD10Q9BYL1 202 aa12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 Q8N2B8 174 aa12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 RCHY1Q96PM5 261 aa12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 C2orf88Q9BSF0 95 aa12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 ALKBH7Q9BT30 221 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-204ENST00000547687 NDUFA4O00483 81 aa12.6□□□□□ -0.39
CHMP1A-204ENST00000547687 FAM162BQ5T6X4 162 aa12.6□□□□□ -0.39
CHMP1A-204ENST00000547687 RNF182Q8N6D2 247 aa12.6□□□□□ -0.39
CHMP1A-204ENST00000547687 C18orf32Q8TCD1 76 aa12.6□□□□□ -0.39
CHMP1A-204ENST00000547687 A0A1W2PS18 150 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 SH2D1AO60880 128 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 SCGB1D1O95968 90 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 KLF5Q13887 457 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 Q8TAT8 98 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 C14orf144Q96I85 54 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 KCNS1Q96KK3 526 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 MEGF8Q7Z7M0 2845 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 TMEM189A5PLL7 270 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 PRAC2D3DTV9 90 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 GPX1P07203 203 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 COTL1Q14019 142 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 PRR31Q5SQ13 230 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 Q6ZWC4 215 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 REC114Q7Z4M0 266 aa12.59□□□□□ -0.39
CHMP1A-204ENST00000547687 NOTCH1P46531 2555 aa12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 RPLP1P05386 114 aaKnown RBP12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 PROK1P58294 105 aa12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 ERCC8Q13216 396 aa12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 RIGQ13278 110 aa12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 UNQ9165/PRO28630Q6UXU0 137 aa12.58□□□□□ -0.4
CHMP1A-204ENST00000547687 TRAV8-2A0A0B4J237 113 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 PKIAP61925 76 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 Q6AWC8 147 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 C8orf86Q6ZUL3 223 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 NDFIP1Q9BT67 221 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 ARMS2P0C7Q2 107 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 BMI1P35226 326 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 GLMPQ8WWB7 406 aa12.57□□□□□ -0.4
CHMP1A-204ENST00000547687 ELANEP08246 267 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 AMTP48728 403 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 ZNF80P51504 273 aaPredicted RBP12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 FOXE3Q13461 319 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 C11orf44Q8N8P7 122 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 MRPL53Q96EL3 112 aaKnown RBP12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 CITED1Q99966 193 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 C16orf95Q9H693 158 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 NAGKQ9UJ70 344 aa12.56□□□□□ -0.4
CHMP1A-204ENST00000547687 TMSB15BA0A087X1C1 80 aa12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 CD33P20138 364 aa12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 PMCHP20382 165 aa12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 BORCS7Q96B45 105 aa12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 PRO1933Q9H354 126 aa12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 A0A1B0GW15 77 aa12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 TCAPO15273 167 aa12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 ZNF324O75467 553 aaPredicted RBP12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 PEF1Q9UBV8 284 aaKnown RBP12.55□□□□□ -0.4
CHMP1A-204ENST00000547687 LOC102724200A0A096LPH7 203 aaPredicted RBP12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 TSTD3H0UI37 97 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 C16orf92Q96LL3 132 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 CLEC5AQ9NY25 188 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 RPS20P60866 119 aaKnown RBP12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 LYZL1Q6UWQ5 148 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 ZNF664Q8N3J9 261 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 KLHDC1Q8N7A1 406 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 MYOZ3Q8TDC0 251 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 AGPAT4-IT1Q9H0P7 198 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 NRN1Q9NPD7 142 aa12.54□□□□□ -0.4
CHMP1A-204ENST00000547687 FABP5P3A8MUU1 101 aa12.53□□□□□ -0.4
CHMP1A-204ENST00000547687 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
CHMP1A-204ENST00000547687 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
CHMP1A-204ENST00000547687 FAM19A2Q8N3H0 131 aa12.53□□□□□ -0.4
CHMP1A-204ENST00000547687 RNF152Q8N8N0 203 aa12.53□□□□□ -0.4
CHMP1A-204ENST00000547687 GATD1Q8NB37 220 aa12.53□□□□□ -0.4
CHMP1A-204ENST00000547687 NIT1Q86X76 327 aa12.52□□□□□ -0.4
CHMP1A-204ENST00000547687 NTF3P20783 257 aa12.52□□□□□ -0.41
CHMP1A-204ENST00000547687 TMEM78Q5T7P6 136 aa12.52□□□□□ -0.41
CHMP1A-204ENST00000547687 RNASEKQ6P5S7 137 aaKnown RBP12.52□□□□□ -0.41
CHMP1A-204ENST00000547687 HSBP1O75506 76 aa12.51□□□□□ -0.41
CHMP1A-204ENST00000547687 ORM1P02763 201 aa12.51□□□□□ -0.41
CHMP1A-204ENST00000547687 ZNF138P52744 262 aa12.51□□□□□ -0.41
CHMP1A-204ENST00000547687 UBE2E2Q96LR5 201 aa12.51□□□□□ -0.41
CHMP1A-204ENST00000547687 KRTDAPP60985 99 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 290.6 ms