RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 DEFB124Q8NES8 71 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 CCDC115Q96NT0 180 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 GPX7Q96SL4 187 aaPredicted RBP2.37□□□□□ -2.03
SCAF11-210ENST00000547654 FAM107BQ9H098 131 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 TMEM133Q9H2Q1 129 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 TMEM138Q9NPI0 162 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 GSKIPQ9P0R6 139 aa2.37□□□□□ -2.03
SCAF11-210ENST00000547654 MARCOQ9UEW3 520 aaPredicted RBP2.37□□□□□ -2.03
SCAF11-210ENST00000547654 TRGV10A0A0A0MS01 117 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 TLCD2A6NGC4 264 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 TMEM212A6NML5 194 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 M0QZK8 103 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 M0R378 163 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 DEGS1O15121 323 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 OR2T1O43869 369 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 TRGC2P03986 189 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 CTSGP08311 255 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 BCL2P10415 239 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 RPS28P62857 69 aaKnown RBP2.36□□□□□ -2.03
SCAF11-210ENST00000547654 UBE2BP63146 152 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 SUPT4H1P63272 117 aaKnown RBP2.36□□□□□ -2.03
SCAF11-210ENST00000547654 FOXF1Q12946 379 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 KHDC3LQ587J8 217 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 AGTRAPQ6RW13 159 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 SIGLECL1Q8N7X8 197 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 OR5A1Q8NGJ0 315 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 OR4C16Q8NGL9 310 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 WFDC5Q8TCV5 224 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 TEX37Q96LM6 180 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 ZNF471Q9BX82 626 aaPredicted RBP2.36□□□□□ -2.03
SCAF11-210ENST00000547654 NDUFB11Q9NX14 153 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 EPDR1Q9UM22 224 aa2.36□□□□□ -2.03
SCAF11-210ENST00000547654 COL27A1Q8IZC6 1860 aaPredicted RBP2.36□□□□□ -2.03
SCAF11-210ENST00000547654 MYO5AQ9Y4I1 1855 aaKnown RBP2.36□□□□□ -2.03
SCAF11-210ENST00000547654 SVEP1Q4LDE5 3571 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 MGAM2Q2M2H8 2515 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 IGHV3-64A0A075B6Q5 118 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 A0A0D9SEW6 157 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 IGKV1-16P04430 117 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 LGALS3P17931 250 aaKnown RBP2.35□□□□□ -2.03
SCAF11-210ENST00000547654 HINT1P49773 126 aaPredicted RBP2.35□□□□□ -2.03
SCAF11-210ENST00000547654 PLCXD2Q0VAA5 305 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 NDUFA5Q16718 116 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 CCDC153Q494R4 210 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 KRTAP13-2Q52LG2 175 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 BRMS1LQ5PSV4 323 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 C1orf140Q5VVS0 124 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 WFDC11Q8NEX6 87 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 OR4D11Q8NGI4 311 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 PFN4Q8NHR9 129 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 BORCS8Q96FH0 119 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 PKMYT1Q99640 499 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 YIPF3Q9GZM5 350 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 PSORS1C2Q9UIG4 136 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 KNTC1P50748 2209 aa2.35□□□□□ -2.03
SCAF11-210ENST00000547654 BORCS7-ASMTA0A0B4J1R7 106 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 IGHV1-18A0A0C4DH31 117 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 IGKV2-24A0A0C4DH68 120 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 TRBV10-2A0A0K0K1G8 114 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 A0A1W2PNM2 257 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 C7orf71A4D174 169 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 HTR1AP08908 422 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 METTL15P1P0C7V9 234 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 RPL7P18124 248 aaKnown RBP2.34□□□□□ -2.03
SCAF11-210ENST00000547654 S100A11P31949 105 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 MYL5Q02045 173 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 IGFBP7Q16270 282 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 CCDC58Q4VC31 144 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 EIF5AL1Q6IS14 154 aaKnown RBP2.34□□□□□ -2.03
SCAF11-210ENST00000547654 C22orf39Q6P5X5 142 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 IGFL1Q6UW32 110 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 OR4E2Q8NGC2 313 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 DCANP1Q8TF63 244 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 TCEAL4Q96EI5 215 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 TMEM126AQ9H061 195 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 RASL12Q9NYN1 266 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 JPT1Q9UK76 154 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 TRAPPC2LQ9UL33 140 aa2.34□□□□□ -2.03
SCAF11-210ENST00000547654 ZNF106Q9H2Y7 1883 aaKnown RBP2.34□□□□□ -2.03
SCAF11-210ENST00000547654 UBR4Q5T4S7 5183 aa2.34□□□□□ -2.04
SCAF11-210ENST00000547654 MAP1AP78559 2803 aaPredicted RBP2.34□□□□□ -2.04
SCAF11-210ENST00000547654 PRRC2CQ9Y520 2896 aaKnown RBP2.34□□□□□ -2.04
SCAF11-210ENST00000547654 RYR2Q92736 4967 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 HERC2O95714 4834 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 J3KT08 172 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 TMEM256-PLSCR3K7ERE1 68 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 CST7O76096 145 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 DBIP07108 87 aaKnown RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 DEFA4P12838 97 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 INSL3P51460 131 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 POLR2HP52434 150 aaKnown RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 TMBIM6P55061 237 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 NDUFA6P56556 154 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 TMEM258P61165 79 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 ERHP84090 104 aaKnown RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 ZNF90Q03938 601 aa2.33□□□□□ -2.04
SCAF11-210ENST00000547654 EIF3IQ13347 325 aaKnown RBP2.33□□□□□ -2.04
SCAF11-210ENST00000547654 AAED1Q7RTV5 226 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 1001.2 ms