RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 IGLV2-11P01706 119 aa9.39□□□□□ -0.91
RBFOX1-208ENST00000547372 CRIP2P52943 208 aaPredicted RBP9.39□□□□□ -0.91
RBFOX1-208ENST00000547372 TMEM133Q9H2Q1 129 aa9.39□□□□□ -0.91
RBFOX1-208ENST00000547372 KALRNO60229 2985 aa9.39□□□□□ -0.91
RBFOX1-208ENST00000547372 OR11H6Q8NGC7 330 aa9.39□□□□□ -0.91
RBFOX1-208ENST00000547372 VCX2Q9H322 139 aa9.39□□□□□ -0.91
RBFOX1-208ENST00000547372 IGKV2-40A0A087WW87 121 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 IGKV2D-40P01614 121 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 GP9P14770 177 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 TAL2Q16559 108 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 TPSG1Q9NRR2 321 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 SPG11Q96JI7 2443 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 TRBV7-3A0A075B6L6 115 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 SH2D1AO60880 128 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 SLC25A16P16260 332 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 LYRM7Q5U5X0 104 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 IGHV3-49A0A0A0MS15 119 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 ZNF56Q15929 161 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 NDUFA4L2Q9NRX3 87 aa9.38□□□□□ -0.91
RBFOX1-208ENST00000547372 IGKV3-7A0A075B6H7 116 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 A0A1W2PPI3 338 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 LINC00694P0DN24 101 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 SRD5A1P18405 259 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 PLEKHB2Q96CS7 222 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 NGBQ9NPG2 151 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 TRAV8-4A0A0B4J246 113 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 IGHV3-66A0A0C4DH42 116 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 TEX49A0A1B0GTD5 131 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 OVOL3O00110 214 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 C17orf58Q2M2W7 97 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 TRGV9Q99603 122 aa9.37□□□□□ -0.91
RBFOX1-208ENST00000547372 C9orf106Q8NAJ2 232 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 IGHV1-18A0A0C4DH31 117 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 LGALS1P09382 135 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 PSMG4Q5JS54 123 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 PRADC1Q9BSG0 188 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 ARRDC1-AS1Q9H2J1 176 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 TRAV2A0A0B4J234 112 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 LY6G6EA0A0G2JKS1 128 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 MGPP08493 103 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 ZNF493Q6ZR52 646 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 NXT2Q9NPJ8 142 aaKnown RBP9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 U3KQA8 63 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 PCSK5Q92824 1860 aa9.36□□□□□ -0.91
RBFOX1-208ENST00000547372 THAP8Q8NA92 274 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 EGR2P11161 476 aaPredicted RBP9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 PMS2CLQ68D20 193 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 GATD1Q8NB37 220 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 BDP1A6H8Y1 2624 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 DMDP11532 3685 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 C10orf126Q8N4M7 172 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 PIFOQ8TCI5 191 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 ZMAT4Q9H898 229 aa9.35□□□□□ -0.91
RBFOX1-208ENST00000547372 FOXC1Q12948 553 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 Q8N1Y9 231 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 CENPVL3A0A0U1RRI6 287 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 F5H697 171 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 PAX8Q06710 450 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 SCGB3A1Q96QR1 104 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 C21orf62Q9NYP8 219 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 OOSP1A8MZH6 123 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 DEFB109BQ30KR1 87 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 FAM57AQ8TBR7 257 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 KLK5Q9Y337 293 aaPredicted RBP9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 U3KQK5 164 aa9.34□□□□□ -0.91
RBFOX1-208ENST00000547372 CNTFRP26992 372 aa9.33□□□□□ -0.92
RBFOX1-208ENST00000547372 OR10J6PQ8NGY7 276 aa9.33□□□□□ -0.92
RBFOX1-208ENST00000547372 TACC2O95359 2948 aa9.33□□□□□ -0.92
RBFOX1-208ENST00000547372 SPENQ96T58 3664 aaKnown RBP9.33□□□□□ -0.92
RBFOX1-208ENST00000547372 RNF125Q96EQ8 232 aa9.33□□□□□ -0.92
RBFOX1-208ENST00000547372 SHISA9B4DS77 424 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 M0R381 172 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 SPRY2O43597 315 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 PLNP26678 52 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 FAM27E3Q08E93 113 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 LAGE3Q14657 143 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 C9orf153Q5TBE3 101 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 DTX2Q86UW9 622 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 TMEM167AQ8TBQ9 72 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 H7C1H1 209 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 CEACAM4O75871 244 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 LOC400499M0QZD8 3231 aa9.32□□□□□ -0.92
RBFOX1-208ENST00000547372 PRSS2P07478 247 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 CGB3P0DN86 165 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 CGB7P0DN87 165 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 RITA1Q96K30 269 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 DUX3Q96PT4 197 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 TRBV19A0A075B6N1 114 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 CD7P09564 240 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 TCF15Q12870 199 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 SORL1Q92673 2214 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 TRAV17A0A0B4J275 112 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 IGKV3-15P01624 115 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 HERVK_113P61574 105 aa9.31□□□□□ -0.92
RBFOX1-208ENST00000547372 EDA2RQ9HAV5 297 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms